Protein Alignment pum and PUM4

DIOPT Version :10

• Sequence 1: NP_524285.2
• Gene: pum / 41094
• FlyBaseID: FBgn0003165
• Length: 1533
• Species: Drosophila melanogaster
• Sequence 2: NP_187647.2
• Gene: PUM4 / 820198
• AraportID: AT3G10360
• Length: 1003
• Species: Arabidopsis thaliana
• Alignment Length: 1218
• Identity: 343/1218 - (28%)
• Similarity: 501/1218 - (41%)
• Gaps: 375/1218 - (30%)

  Fly   337 VYMGGQTTVPMGAAMMPPQNQYMNSSAVAAANRN---------AAITTSTAKKLWEKSDGKGVSS 392
            |:..|.....:...:....|||:|       |.|         ::||||...:|....:.:
plant    55 VHRSGSAPPTVEGLLRAMDNQYLN-------NNNSDHRDVGNISSITTSNGVELLSDDELR---- 108

  Fly   393 STPGGPLHPLQIPGIGDPSSVWKDHTWSTQGENILVPPPSRAYAHGGASDTSNSGNAGILSPRDS 457
                  .||           .:..:.:|.:..|..:|||                   :||..|.
plant   109 ------WHP-----------EYLSYYYSNEHSNPRLPPP-------------------LLSREDW 137

  Fly   458 TCAKVVEYVFSGSPTNKDSSLSGLEPHLRNLKFDDNDKSRDDKEKANSPFDTNG--LKKDDQVTN 520
            ..|:                           :|.:::          |.||..|  .||..:|.|
plant   138 RVAQ---------------------------RFHNSE----------SVFDPVGEWRKKTVEVDN 165

  Fly   521 SNGVVNGIDDDKGFNRTPGSRQPSPAEESQPRPPNLLFPPLPFNHMLMDHGQGMGGGLGGVVGSG 585
            |:.:         |:..||    .|.|:::              :.||:        |...|..|
plant   166 SSSL---------FSVQPG----VPVEQAE--------------NDLME--------LRNAVAQG 195

  Fly   586 N---------------GVGGGSGGGGAGGAYA-----AHQQMAAQMSQLQPP------------- 617
            .               |:.|.||.|....::|     ..::.||..|||..|
plant   196 RSQKVQRLDQGREDLIGLSGYSGLGPRRKSFADILQEGLERDAALGSQLSRPASCNTFRDMKDAA 260

  Fly   618 -MMNGVGGGMPMAAQSPMLNHQAAGPNHMESPGNLL---------QQQNFDVQQLFRSQNPGLAA 672
             :.|...||.    .||:..|.:.......||..:|         :.:..|...:.||...||..
plant   261 VLSNFSAGGF----DSPLAFHDSLHSTAKNSPNTMLGSTMSSPVPRNRTPDSHLVGRSTASGLPP 321

  Fly   673 VAT--------NAAAAAAAAAAATSAASAAAAVGAPPVPNGSLQQSQQQQQQQQQQQQQQQMHMA 729
            :.|        |....|.....:.:||..|..:       ..|..|:..|.::...|.|.|:.:.
plant   322 IGTRVGPVEKKNTFGTAIQNCESYTAADVADTL-------SRLNMSEMSQVKENHMQSQLQVELE 379

  Fly   730 AASQQFLAAQQQAQNAAYAAQQATSYVINPGQEAAPYMGMIAAAQMPYYGVAPWGMYPGNLIPQQ 794
            ..|                  ....|:.|..::|                           :.||
plant   380 NQS------------------DVMRYIPNGHKKA---------------------------LRQQ 399

  Fly   795 GTQPRRPLTPSQQGAENQPYQVIPAFLDHTGSLLMGGPRTGTPMRLVSPAPVLVPPGATRAGPPP 859
            .|            ||.:         ||..|...|| .:|....|          ||:..|
plant   400 NT------------AETK---------DHLFSANYGG-MSGYGASL----------GASTVG--- 429

  Fly   860 PQGPQLYQPQPQTAQQNLYSQQNGSSVGGLALNTSSLTGRRDSFDRSTSAFSPSTMDYTSSGVAA 924
             ...|:..|:..::..:|||..:.|.:|.:.|:..::   |:.....|        |::::|...
plant   430 -SHGQVNIPKRTSSSASLYSTSDHSRLGSVGLSDVNI---RNGNINGT--------DFSTAGGYM 482

  Fly   925 AANAVNSTVAQAAAAAAAAAAARGKWPGAMSGAASGAYGALGAG---------NASASPLGAPIT 980
            |.|.:||.                    |...:|.|:: ..|.|         |..||.|.:|:.
plant   483 AKNKLNSL--------------------AEHYSAEGSH-LTGDGDRQSLNRLINQVASELHSPVM 526

  Fly   981 PPPSAQSCLLGS--RAPGAESRQRQ-------------------QQQQQLAAVGLPATAAAAQAA 1024
            .|..:|.....|  .||...|..|.                   |.:|||
plant   527 DPHYSQYLHTASSTAAPIDHSLIRNNFGTSNGDTANEYLAMLLAQNRQQL--------------- 576

  Fly  1025 VAAAANNMFGSNSSIFSNPLAIPGTAAVAAAAAAAAAANSR--QVAATAAAAAAVAAAAGGVGGA 1087
                 .|:..:||..|.:|....|...: .....:.:.|||  |....:.:|:.:....||:.|:
plant   577 -----GNLNAANSRFFESPSYDLGNMYL-GNHLPSPSKNSRNFQNMRMSQSASMMKVPFGGLQGS 635

  Fly  1088 P-----QPGRSRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSE 1147
            .     ....:.|||.|:|.:..:|:|.::..|::|||.||:||||||||||.||..||..:|.|
plant   636 SHVDIGSTAEASLLEGFKNNKTRSLELSEIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPE 700

  Fly  1148 ILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQ 1212
            ||....:||||||||||||||||.||.:|:..|..||.||||.|:||||||||||||||.:..||
plant   701 ILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQ 765

  Fly  1213 QQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 1277
            |..:|.||||.|:|||.|||||||:|||||.:....:||||::|.|:|.:|||||||||||||:|
plant   766 QARMVKELDGSVMKCVHDQNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVL 830

  Fly  1278 EHCTAEQTTP-ILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFA 1341
            ||....:|.. |::|:.:....|.|||||||||||:::|||..::|.:||.:.|:::.:||.|||
plant   831 EHIDDIETQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFA 895

  Fly  1342 SNVVEKCVTHATRGERTGLIDEVCTFND--NALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKI 1404
            |||||||:|.....||..|::|:..:.|  ..|..||||.:.||||||:::..:...|..::::|
plant   896 SNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLALILSRI 960

  Fly  1405 RPHMAALRKYTYGKHINAKLEKYYMKITNPITVGTGAGGVPAASSAAA 1452
            :.|:.||::|||||||.|::||         .:.||...:..:||.||
plant   961 KVHLNALKRYTYGKHIVARVEK---------LITTGERRIGLSSSLAA 999

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pum	NP_524285.2	Pumilio	1106..1424	CDD:153420	178/320 (56%)
PUM4	NP_187647.2	NABP	313..663	CDD:400378	92/490 (19%)
		Pumilio	659..980	CDD:153420	178/320 (56%)