Protein Alignment pum and PUM3

DIOPT Version :9

• Sequence 1: NP_001262403.1
• Gene: pum / 41094
• FlyBaseID: FBgn0003165
• Length: 1533
• Species: Drosophila melanogaster
• Sequence 2: NP_001324126.1
• Gene: PUM3 / 817463
• AraportID: AT2G29140
• Length: 964
• Species: Arabidopsis thaliana
• Alignment Length: 1126
• Identity: 323/1126 - (28%)
• Similarity: 462/1126 - (41%)
• Gaps: 307/1126 - (27%)

  Fly   426 ILVPPPSRAYAHGGASDTSNSGN----AGIL---SPRDSTCAKVVE-----YVFSGSPTNKDSSL 478
            :::|...|...|.|..|:|...:    .|:|   ..|....|..:|     |....:|...|.||
plant     1 MMIPELGRRPMHRGNEDSSFGDDYEKEIGVLLGEQQRRQVEADELERELNLYRSGSAPPTVDGSL 65

  Fly   479 SGLEPHLRN------LKFDDNDKSR----DDKEKANSP--------------------FDTNGLK 513
            |........      |:|...:|..    ||:|....|                    .....|:
plant    66 SAAGGLFSGGGGASFLEFGGVNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLR 130

  Fly   514 KDDQVTNSNGVVNGIDDDKG-------FNRTPGSRQPSPAEESQPRPPNLLFPPLPFNHMLMDHG 571
            ...::..||.|:.|:.|.:.       |:..||.....|...:.....|.|
plant   131 VAQRLKGSNNVLGGVGDRRKVNDSRSLFSMPPGFEAGKPGASASEWDANGL-------------- 181

  Fly   572 QGMGGGLGGV--------------------------------VGSGNGVG-GGSGGGGAGGAYAA 603
              :|.||||.                                |.|.|.:. ..|.|.||...|..
plant   182 --IGLGLGGKQKSFADIFQADMGHPVVQQPSRPASRNTFDENVDSNNNLSPSASQGIGAPSPYCY 244

  Fly   604 HQQMAAQMSQLQPPMMNGVGGGMPMAAQSPMLNHQAAGPNHMESPGNLLQQQNFDVQQLFRSQNP 668
            ...:.:.:|:...|...|: ..:|....:|:      |...:.|.    .::|...|..|.....
plant   245 AAVLGSSLSRNGTPDPQGI-ARVPSPCLTPI------GSGRVSSN----DKRNTSNQSPFNGVTS 298

  Fly   669 GLAAVATNAAAAAAAAAAATSAASAAAAVGAPPVPNGSLQQSQQQQQQQQQQQQQ----QQMHMA 729
            ||     |.::....|.:..:.:.           .|.|.:..|.:|..::.:..    |..|..
plant   299 GL-----NESSDLVNALSGLNLSG-----------TGGLDERGQAEQDVEKVRNYMFGLQDGHNE 347

  Fly   730 AASQQFLAAQQQA------QNAAYAAQQATSYVINPGQEAA-PYMGMIAAAQMP-YYGVAPWGMY 786
            .....|.....||      :|:.....|.::|  |.|...| ||.    ....| ||.:.|  ..
plant   348 VNPHGFPNRSDQARGTASCRNSQMRGSQGSAY--NSGSGVANPYQ----HHDSPNYYALNP--AV 404

  Fly   787 PGNLIPQQGTQPRRPLTPSQQGAENQPYQVIPAFLDHTGSLLMGGPR------------------ 833
            ...:..|.||....|:  .:..:....|..:.:.| |.||.:..|..
plant   405 ASMMANQLGTNNYSPM--YENASATLGYSAMDSRL-HGGSFVSSGQNLSESRNIGRVGNRMMEGG 466

  Fly   834 TGTPMRLVSPAPVLVPPGATRAGPPPPQGPQLYQPQPQTAQQNLYSQQNGSSVGGLALNTSSLTG 898
            ||.|..|..|                                 :|.|.            :..:.
plant   467 TGHPSHLADP---------------------------------MYHQY------------ARFSE 486

  Fly   899 RRDSFDRSTSAFSPSTMDYTSSGVAAAANAVNSTVAQAAAAAAAAAAARGKWPGAMSGAASGAYG 963
            ..||||    ..:..:||
plant   487 NADSFD----LLNDPSMD----------------------------------------------- 500

  Fly   964 ALGAGNASASPLGAPITPPPSAQSCLLGSRAPGAESRQRQQQQQQLAAVGLPATAAAAQAAVAAA 1028
             ...||:..:.|        ..|...|||               |.:..|||..:.:..:. :..
plant   501 -RNYGNSYMNML--------EIQRAYLGS---------------QKSQYGLPYKSGSPNSH-SYY 540

  Fly  1029 ANNMFGSNSSIFSNPLA---IPGTAAVAAAAAAAAAANSRQVAATAAAAAAV-------AAAAGG 1083
            .:..||||.|...:|||   :|.:.....:.......|.|..|||......|       |:...|
plant   541 GSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRGEVNMRYPAATRNYTGGVMGSWHMDASLDEG 605

  Fly  1084 VGGAPQPGRSRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEI 1148
            .|       |.:||:|::.:....:|.::|.|:||||.||:||||||||||.||..||.||:.||
plant   606 FG-------SSMLEEFKSNKTRGFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEI 663

  Fly  1149 LAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ 1213
            :..|.:||||||||||||||||.|.|.|:..||.::..:||.|:||||||||||||:|.:..:|:
plant   664 MPKALALMTDVFGNYVIQKFFEHGLPPQRRELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQK 728

  Fly  1214 QEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILE 1278
            .::|.||||||::||:|||||||||||||||....::|||:.|.|.|.:|||||||||||||:||
plant   729 IQMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLE 793

  Fly  1279 HCTAEQT-TPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFAS 1342
            ||....| :.:::|:......|.||||||||:||||||||.::::::|..:.||::.:||.||||
plant   794 HCHNPDTQSKVMEEILSTVSMLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFAS 858

  Fly  1343 NVVEKCVTHATRGERTGLIDEV--CTFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIR 1405
            ||||||:|.....||..|::|:  .|..:..|..|||||:|||||||:::..:..|.:.::|:|:
plant   859 NVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIK 923

  Fly  1406 PHMAALRKYTYGKHINAKLEK 1426
            .|:.||:||||||||.|::||
plant   924 VHLNALKKYTYGKHIVARVEK 944

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pum	NP_001262403.1	Pumilio	1106..1424	CDD:153420	181/320 (57%)
PUM3	NP_001324126.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5099
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm2436
orthoMCL	1	0.900	-	-		OOG6_100436
Panther	1	1.100	-	-	O	PTHR12537
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X849
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	7	6.770