| Sequence 1: | NP_001262403.1 | Gene: | pum / 41094 | FlyBaseID: | FBgn0003165 | Length: | 1533 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006239091.1 | Gene: | Pum1 / 362609 | RGDID: | 1307190 | Length: | 1193 | Species: | Rattus norvegicus |
| Alignment Length: | 1403 | Identity: | 518/1403 - (36%) |
|---|---|---|---|
| Similarity: | 649/1403 - (46%) | Gaps: | 414/1403 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 219 PHQQHPQQQQQQQQAQNQGHPHHLMGGGNGLGNGNGLGIQHPGQQQQQQQQQQQQQHPGQYNANL 283
Fly 284 LNHAAALGHMSSYAQSGGSMYDHHGGAMHPGMNGGMPKQQPLGPPGAGGPQDYVYMGGQTTV--- 345
Fly 346 -PMG--------AAMMPPQNQYMNSSAVAAANRNAAITTSTAKKLWEKSDGKGVSSSTPGGPLHP 401
Fly 402 LQIPGI--GDPSSVWKDHTWSTQGENILVPPPSRAYAHGGASDTSNSGNAGILSPRDST---CAK 461
Fly 462 VVEYVFSGSPTNKDSSLSGLEPHLRNLKFDDNDKSRDDKEKANSPFD---TNGLKKDDQV---TN 520
Fly 521 SNGVVNGIDDD-KGFNRTPGSRQPSPAEESQPRPPNLLFPPLPFNHMLMDHGQGMGGGLGGVVGS 584
Fly 585 GNGVGGGSGGGGAGGAYAAHQQMAAQMSQLQPPMMNGVGGGMPMAAQSPMLNHQAAGPNHMESPG 649
Fly 650 NLLQQQNFDVQQLFRSQNPGLAAVATNAAAAAAAAAAATSAASAAAAVGAPPVPNGSLQQSQQQQ 714
Fly 715 QQQQQQQQQQQMHMAAASQQFLAAQQQAQNAAYAAQQ----------------ATSYVIN---PG 760
Fly 761 QEAAPY-MGMIAAAQM-------PYYGVAPWGMYPGNLIPQQ----------------------- 794
Fly 795 -----GTQPRRPLTP--SQQGAENQP-----------------------YQVI--PAFLDHTGSL 827
Fly 828 LM-GGPRT--GTPMRLVSPAPVLVPPGATRA---------------------GPPPPQGPQLYQP 868
Fly 869 QPQTAQQNLYSQQNGSSVGGLALNTSSLTGRRDSFDRSTSAFSPSTMDYTSSGVA-AAANAVNST 932
Fly 933 VAQAAAAAAAAAAARGKWPGAMSGAASGA------------------YGALGAGNASASPLGAPI 979
Fly 980 ---------TPPP------SAQSCLLG----------SRAPGAESRQRQQQQQQLAAVGLPATAA 1019
Fly 1020 AAQAAVAAAANNMFGSNSSIFSNPLAIPGTAAVAAAAAAAAAANSRQVAATAAAAAAVAAAAGGV 1084
Fly 1085 GGAPQPGRSRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEIL 1149
Fly 1150 AAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQ- 1213
Fly 1214 -QEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRIL 1277
Fly 1278 EHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFAS 1342
Fly 1343 NVVEKCVTHATRGERTGLIDEVCTFND---NALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKI 1404
Fly 1405 RPHMAALRKYTYGKHINAKLEKYYMKITNPITVGTGAG 1442 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| pum | NP_001262403.1 | Pumilio | 1106..1424 | CDD:153420 | 250/322 (78%) |
| Pum1 | XP_006239091.1 | Pumilio | 848..1171 | CDD:153420 | 250/322 (78%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166342023 | |
| Domainoid | 1 | 1.000 | 136 | 1.000 | Domainoid score | I4804 |
| eggNOG | 1 | 0.900 | - | - | E1_COG5099 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 649 | 1.000 | Inparanoid score | I763 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 1 | 1.000 | - | - | FOG0000719 | |
| OrthoInspector | 1 | 1.000 | - | - | otm44506 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_100436 | |
| Panther | 1 | 1.100 | - | - | O | PTHR12537 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X849 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 12 | 11.840 | |||||