Protein Alignment pum and puf-6

DIOPT Version :9

• Sequence 1: NP_001262403.1
• Gene: pum / 41094
• FlyBaseID: FBgn0003165
• Length: 1533
• Species: Drosophila melanogaster
• Sequence 2: NP_496773.1
• Gene: puf-6 / 174947
• WormBaseID: WBGene00004242
• Length: 485
• Species: Caenorhabditis elegans
• Alignment Length: 395
• Identity: 93/395 - (23%)
• Similarity: 177/395 - (44%)
• Gaps: 76/395 - (19%)

  Fly  1116 IVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVF----GNYVIQKFFEFGTP-E 1175
            :::|:.|..|.:|::......:..:.:....|.|..:.:|...:.    ||:::||..|..|| |
 Worm    93 LIDFAIDPSGVKFLEANYPLDSEDQIRKAVFEKLTESTTLFVGLCHSRNGNFIVQKLVELATPAE 157

  Fly  1176 QKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCV-KDQNGNHVVQK 1239
            |:..|...:.|.:|.:....:.|||:|.||:........:::.||....|..: .||...||:|:
 Worm   158 QRELLRQMIDGGLLVMCKDKFACRVVQLALQKFDHSNVFQLIQELSTFDLAAMCTDQISIHVIQR 222

  Fly  1240 CIECVDPVALQFIINAFKG--QVYSLSTHPYGCRVIQRILEHCTAEQTTPI----LDELH----- 1293
            .::.:......|.::....  .:.::....||||::|::::........|.    :..||
 Worm   223 VVKQLPVDMWTFFVHFLSSGDSLMAVCQDKYGCRLVQQVIDRLAENPKLPCFKFRIQLLHSLMTC 287

  Fly  1294 --EHTEQLIQDQYGNYVIQHVLE-HGKQE-------DKSILINSVRGKVLVLSQHKFASNVVEKC 1348
              .:..:|..:::.|||||:|:: .|..|       ||.:|.|     :|.:||.|:||:|:|..
 Worm   288 IVRNCYRLSSNEFANYVIQYVIKSSGIMEMYRDTIIDKCLLRN-----LLSMSQDKYASHVIEGA 347

  Fly  1349 VTHATRGERTGLIDEVCT-------FNDNALHVMMKDQYANYVVQKMIDV-------SEPTQL-- 1397
            ...|.......:::|:.:       .|.:||.:::..||.|||||:||.:       .|..||
 Worm   348 FLFAPPALLHEMMEEIFSGYVKDVELNRDALDILLFHQYGNYVVQQMISICTAALIGKEERQLPP 412

  Fly  1398 ----------KKLMTKIRPHMAALRKYTYGKHINAKLEKYYMKITNPITVGTGAGGVPAASSAAA 1452
                      :|:..::..|.:.|.:::.||.|...:.::               |||   :|||
 Worm   413 AILLLYSGWYEKMKQRVLQHASRLERFSSGKKIIDSVMRH---------------GVP---TAAA 459

  Fly  1453 VSSGA 1457
            :::.|
 Worm   460 INAQA 464

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pum	NP_001262403.1	Pumilio	1106..1424	CDD:153420	86/360 (24%)
puf-6	NP_496773.1	Pumilio	82..449	CDD:277559	86/360 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5099
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR12537
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910