Protein Alignment pum and puf-8

DIOPT Version :9

• Sequence 1: NP_001262403.1
• Gene: pum / 41094
• FlyBaseID: FBgn0003165
• Length: 1533
• Species: Drosophila melanogaster
• Sequence 2: NP_495523.3
• Gene: puf-8 / 174197
• WormBaseID: WBGene00004244
• Length: 535
• Species: Caenorhabditis elegans
• Alignment Length: 555
• Identity: 184/555 - (33%)
• Similarity: 279/555 - (50%)
• Gaps: 73/555 - (13%)

  Fly   906 STSAFSPSTMDYTSSGVAAAANAVNSTVAQAAAAAAAAAAARGKWPGAMSGAASGAYGALGAGNA 970
            :|..|.||.....|.|.:..|..:..:|.                     |:...:||.    :.
 Worm     9 NTCTFDPSASPIESLGRSIGAQKIVDSVC---------------------GSPIRSYGR----HI 48

  Fly   971 SASPLGAPITPPPSAQSCLL---GSRAPGAESRQRQQQQQQLAAVGLPATAAAAQAAVAAAAN-- 1030
            |.:|....:...|..|....   |.:..|         |..|...|.|.:...||..:..::|
 Worm    49 STNPKNERLPDTPEFQFATYMHQGGKVIG---------QNTLHMFGTPPSCYCAQENIPISSNVG 104

  Fly  1031 -----------NMFGSNSSIFSNPLAIPGTAAVAAAAAAAAAANSRQVAATAAAAAAVAAAAGGV 1084
                       |...:.|::|||.:         .....|.|.|..|:....:.:..|.......
 Worm   105 HVLSTINNNYMNHQYNGSNMFSNQM---------TQMLQAQAYNDLQMHQAHSQSIRVPVQPSAT 160

  Fly  1085 GGAPQPGRSRLLEDFRNQRY-------PNLQLRDLANHIVEFSQDQHGSRFIQQKLERA-TAAEK 1141
            |....|.|.....|....||       .||:|.|:...:::|::||.|||||||:|..: ...||
 Worm   161 GIFSNPYREPTTTDDLLTRYRANPAMMKNLKLSDIRGALLKFAKDQVGSRFIQQELASSKDRFEK 225

  Fly  1142 QMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALE 1206
            ..:|.|:::.|..|:.|:|||||:|||||:|.......|...:...|.:.|.|||.|||:|||||
 Worm   226 DSIFDEVVSNADELVDDIFGNYVVQKFFEYGEERHWARLVDAIIDRVPEYAFQMYACRVLQKALE 290

  Fly  1207 SISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAF---KGQVYSLSTHPY 1268
            .|:...|.:|:.::...:.:|:|||||||||||.||.|.|..:|||::..   ...:|.:|..||
 Worm   291 KINEPLQIKILSQIRHVIHRCMKDQNGNHVVQKAIEKVSPQYVQFIVDTLLESSNTIYEMSVDPY 355

  Fly  1269 GCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVL 1333
            ||||:||.||||:..||.|::.::|:..:::..:||||||:|||:|||.:||:.:::..|...:.
 Worm   356 GCRVVQRCLEHCSPSQTKPVIGQIHKRFDEIANNQYGNYVVQHVIEHGSEEDRMVIVTRVSNNLF 420

  Fly  1334 VLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHV---MMKDQYANYVVQKMIDVSEPT 1395
            ..:.||::|||:|||:.......::.::...|...:.::.:   ||||||||||||||.|.....
 Worm   421 EFATHKYSSNVIEKCLEQGAVYHKSMIVGAACHHQEGSVPIVVQMMKDQYANYVVQKMFDQVTSE 485

  Fly  1396 QLKKLMTKIRPHMAALRKYTYGKHINAKLEKYYMK 1430
            |.::|:..:|||:..||::.:||||.||||||:.|
 Worm   486 QRRELILTVRPHIPVLRQFPHGKHILAKLEKYFQK 520

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pum	NP_001262403.1	Pumilio	1106..1424	CDD:153420	138/324 (43%)
puf-8	NP_495523.3	Pumilio	189..514	CDD:153420	138/324 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5099
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S1682
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000719
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100436
Panther	1	1.100	-	-	O	PTHR12537
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1032
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	9	8.750