Protein Alignment pum and fbf-1

DIOPT Version :9

• Sequence 1: NP_001262403.1
• Gene: pum / 41094
• FlyBaseID: FBgn0003165
• Length: 1533
• Species: Drosophila melanogaster
• Sequence 2: NP_495216.1
• Gene: fbf-1 / 174016
• WormBaseID: WBGene00001401
• Length: 614
• Species: Caenorhabditis elegans
• Alignment Length: 405
• Identity: 100/405 - (24%)
• Similarity: 189/405 - (46%)
• Gaps: 74/405 - (18%)

  Fly  1098 DFRNQRYPNLQLRDL--ANHIVEFSQDQHGSRFIQQKLERA-TAAEKQMVFSEILAAA---YSLM 1156
            |...:....|.|.::  :..:::|:.|:.|.:|:::.::.: |:.:|..:|.:::...   ..|.
 Worm   172 DSNGEMRSRLSLSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLS 236

  Fly  1157 TDVFGNYVIQKF-------FEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQ 1214
            |::||||.:|:.       ::....:::..|...:...:..:.|..:.|||||.:|:::......
 Worm   237 TNIFGNYFVQEIIGMSLTTYDDDNIKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLAC 301

  Fly  1215 EIVHEL--DGHVLKCVKDQNGNHVVQKCIECVDPVALQFIIN--AFKGQVYSLSTHPYGCRVIQR 1275
            ::|..|  |..::....|||.|||:||.:..:.....:||::  |....:..:....|||||:|.
 Worm   302 KLVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQICFDKYGCRVVQT 366

  Fly  1276 ILEHCTAEQTTPILDELHEH----------------TEQLIQDQYGNYVIQHVLEHGKQEDKSIL 1324
            |:|..||:.....|....:|                .::|..::|.||:|||::.:   :|.::.
 Worm   367 IIEKLTADSINVDLTSAAQHLRERALQRLMTSVTNRCQELATNEYANYIIQHIVSN---DDLAVY 428

  Fly  1325 INSVRGKVLV-----LSQHKFASNVVEKCVTHATRGERTGLIDEVCTFN---------DNALHVM 1375
            ...:..|.|:     |||.||||:||||...||.......::||:  |:         .:||.:|
 Worm   429 RECIIEKCLMRNLLSLSQEKFASHVVEKAFLHAPMELLAEMMDEI--FDGYMPHPGTGKDALDIM 491

  Fly  1376 MKDQYANYVVQKMIDV--------------------SEPTQLKKLMTKIRPHMAALRKYTYGKHI 1420
            |..|:.|||||.|:.:                    |....||||.:::......|.:::.||.:
 Worm   492 MFHQFGNYVVQCMLTICCDAVSGRRQTKEGSYDHANSFQVWLKKLHSRVTKERHRLSRFSSGKKM 556

  Fly  1421 NAKLEKYYMKITNPI 1435
            ...|.  :::.|:||
 Worm   557 IETLA--HLRSTHPI 569

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pum	NP_001262403.1	Pumilio	1106..1424	CDD:153420	95/384 (25%)
fbf-1	NP_495216.1	Pumilio	180..560	CDD:277559	95/384 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5099
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S1682
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR12537
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.860