DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beag and SMU2

DIOPT Version :9

Sequence 1:NP_649865.1 Gene:beag / 41091 FlyBaseID:FBgn0037660 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_180214.1 Gene:SMU2 / 817187 AraportID:AT2G26460 Length:585 Species:Arabidopsis thaliana


Alignment Length:608 Identity:182/608 - (29%)
Similarity:274/608 - (45%) Gaps:174/608 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 KKGQSSSERNDLRRKKKNFYAALKKQEDVKLQEL-SEKYRDRARERRDGANPDYVNVSTPGHGSS 129
            |..:|..:....||:::            ||:|. :.||||||:|||:..||||       ..|.
plant     2 KPSKSHHKEKTARRREE------------KLEESDNPKYRDRAKERRENQNPDY-------DPSE 47

  Fly   130 TNAYRAVAPDMKSGIDAQERRRRIIQESKFLGGDIQHTHLVKGLDYALLQKVRSELHSKEAEEEE 194
            .:::.||||.....|.|.:..:..|:.||:||||::|||||||||||||.|||||:..|...|: 
plant    48 LSSFHAVAPPGAVDIRAADALKISIENSKYLGGDVEHTHLVKGLDYALLNKVRSEIVKKPDGED- 111

  Fly   195 IAAAVAREKLAEAAAAAEQLEAERRESEDINAINGALARNIYNLVQARRSKEVPRNELFAPGRMA 259
                      .:....:...|.:|.....|      .|:::|..: .:....:..||:|.||||.
plant   112 ----------GDGGKTSAPKEDQRVTFRTI------AAKSVYQWI-VKPQTIIKSNEMFLPGRMT 159

  Fly   260 YVIDLDDELGESDIPTTLKRSKFEVPVSQEDVATLTTNDIVINKLSQILSYLRAGGRNK--KNKK 322
            :|.|::... ..||||||.|||.:.||.:|.| |:..:..|::::::|:||||.|...|  |.||
plant   160 FVYDMEGGY-THDIPTTLYRSKADCPVPEEFV-TVNVDGSVLDRIAKIMSYLRLGSSGKVLKKKK 222

  Fly   323 RDKD-----KPLFYEKEVENLRGSSSNGGS------------------SRHATSSSS-------- 356
            ::||     ..:..:.:.::.:....||.|                  ..|...|:.        
plant   223 KEKDGKGKMSTIANDYDEDDNKSKIENGSSVNISDREVLPPPPPLPPGINHLDLSTKQEEPPVAR 287

  Fly   357 --------------NMGGK---SAPLGDNI------------YDD-----------------IGD 375
                          .:.||   .:|:.:::            :|:                 .|.
plant   288 TDDDDIFVGEGVDYTVPGKDVTQSPISEDMEESPRDKEKVSYFDEPAYGPVQEKVPYFAEPAYGP 352

  Fly   376 YQPSATRPERN------RQEQGKSAPSYFGD----------GPPEASEEPIISSIPPPPKIS--- 421
            .||||.:..::      .|.|| .||.|.|:          |..|...:|.:......|:..   
plant   353 VQPSAGQEWQDMSAYGAMQTQG-LAPGYPGEWQEYQYAEQTGYQEQYLQPGMEGYEVQPETDVLL 416

  Fly   422 ----------------------------KAMAARFAEP----EGYAECYPGLEEMNDAIDDSDDE 454
                                        :...||..:|    |.|:|||||.:|.|..|..||:|
plant   417 DPQLMSQEEKDRGLGSVFKRDDQRLQQLRESDAREKDPTFVSESYSECYPGYQEYNHEIVGSDEE 481

  Fly   455 VDYTKMDLGNK-KGPIGRWDFDTQEEYSDYMSTKEALPKAAFQYGVKMQDGRKTRKNKTEKNEKA 518
            .|.:|||:|.| ||.:.||||:|:||:..|...|||:||||||:||||||||||||...::::| 
plant   482 PDLSKMDMGGKAKGGLHRWDFETEEEWEKYNEQKEAMPKAAFQFGVKMQDGRKTRKQNRDRDQK- 545

  Fly   519 ELDREWQKIQTIIQKRKLPKDGG 541
             |:.|..:|..|:.::|:.|:||
plant   546 -LNNELHQINKILTRKKMEKEGG 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beagNP_649865.1 RED_N 87..315 CDD:285099 84/228 (37%)
RED_C 434..539 CDD:285098 55/105 (52%)
SMU2NP_180214.1 RED_N 13..214 CDD:400248 87/239 (36%)
RED_C 461..567 CDD:400247 56/107 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 134 1.000 Domainoid score I1634
eggNOG 1 0.900 - - E1_KOG2498
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 262 1.000 Inparanoid score I962
OMA 1 1.010 - - QHG59763
OrthoDB 1 1.010 - - D500537at2759
OrthoFinder 1 1.000 - - FOG0004624
OrthoInspector 1 1.000 - - oto3953
orthoMCL 1 0.900 - - OOG6_104385
Panther 1 1.100 - - LDO PTHR12765
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4337
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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