DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beag and Wdr55

DIOPT Version :9

Sequence 1:NP_649865.1 Gene:beag / 41091 FlyBaseID:FBgn0037660 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_080740.2 Gene:Wdr55 / 67936 MGIID:1915186 Length:388 Species:Mus musculus


Alignment Length:238 Identity:50/238 - (21%)
Similarity:89/238 - (37%) Gaps:68/238 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 KQEDVKLQELSEKYRDRARERRDGANPDYVNVSTPGHGSSTNAYR--AVAPDMKSGI-----DAQ 147
            ::||:...:.:.:.||         .|:.:.:..|..|.:.:..|  ..|.|:...:     ..|
Mouse    16 EEEDLDSTKAAPRIRD---------TPEDIVLEAPASGLAFHPTRDLLAAGDVDGDVFVFAYSCQ 71

  Fly   148 ERRRRIIQESKFLGGDIQHTHLVKGLDYALLQKVRSELHSKEAEEEEIAAAVAREKLAEAAAAAE 212
            |      .|:|.|.....|           |:..|:.:.|::.::   ...|:::| |......|
Mouse    72 E------GETKELWSSGHH-----------LKSCRAVVFSEDGQK---LVTVSKDK-AIHILDVE 115

  Fly   213 QLEAERRESEDINA-INGALARNIYNLVQA---------RRSKEVPRNELFAPGRMAYVIDL--- 264
            |.:.|||.|:..:| ||..|..:...||..         .:.||.|..::  .....|:.|:   
Mouse   116 QGQLERRISKAHSAPINSVLLVDENALVTGDDTGGIRLWDQRKEGPLMDM--RQHEEYIADMALD 178

  Fly   265 -----------DDELGESDIPTTLKRSKFEVPVSQEDVATLTT 296
                       |..||..:|    ||.:||: :|:.....||:
Mouse   179 PAKKLLLTASGDGCLGVFNI----KRRRFEL-LSEPQSGDLTS 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beagNP_649865.1 RED_N 87..315 CDD:285099 50/238 (21%)
RED_C 434..539 CDD:285098
Wdr55NP_080740.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 4/25 (16%)
WD 1 37..76 8/44 (18%)
WD40 <43..338 CDD:225201 44/202 (22%)
WD40 repeat 43..82 CDD:293791 9/44 (20%)
WD 2 83..122 10/53 (19%)
WD40 84..331 CDD:295369 35/155 (23%)
WD40 repeat 89..126 CDD:293791 11/40 (28%)
WD 3 126..164 9/37 (24%)
WD40 repeat 131..166 CDD:293791 8/36 (22%)
WD 4 167..206 10/43 (23%)
WD40 repeat 173..207 CDD:293791 9/38 (24%)
WD 5 209..248 2/8 (25%)
WD40 repeat 214..251 CDD:293791 2/3 (67%)
WD 6 251..290
WD40 repeat 259..296 CDD:293791
WD 7 293..333
WD40 repeat 303..323 CDD:293791
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..388
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1814
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

Return to query results.
Submit another query.