DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm2 and kdm7a

DIOPT Version :10

Sequence 1:NP_649864.2 Gene:Kdm2 / 41090 FlyBaseID:FBgn0037659 Length:1345 Species:Drosophila melanogaster
Sequence 2:NP_001072664.1 Gene:kdm7a / 780121 XenbaseID:XB-GENE-5900920 Length:922 Species:Xenopus tropicalis


Alignment Length:1041 Identity:255/1041 - (24%)
Similarity:386/1041 - (37%) Gaps:354/1041 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 QLRERK--QRKLYLEEWSLGDEDG-----EGTRGFSVAEKLESSKFAQA-GMVREMRGCDLTVAF 99
            ||::|:  .|..|.|     .:||     .|||.|  .::|::..|..| .::.:|.|..||..:
 Frog    62 QLKKRRNWHRHDYTE-----PDDGTKPVQAGTRTF--IQQLQARSFPSADDLLLKMNGSQLTQRY 119

  Fly   100 LQQHGFNIPLLFRDKAGLGLRMPDPQEFTVNDVRLCVGSRRLLDVMDVNTQKNLQMTMKEWQQYY 164
            |::.|||:|::......||||:| |..|:|.||...||..:::||:||..|.:.:|.:|.:.:|:
 Frog   120 LEKQGFNLPIMVPRLDDLGLRLP-PPTFSVMDVERYVGGEKIIDVIDVARQADSKMKLKNFVKYF 183

  Fly   165 DSPQKDRLLNVISLEFSHTRLDRFVQSPEIVRQIDWVDVVWPKQLKDAQREGTNLLGGMMYPKVQ 229
            .:|.:.::|||||||||.|::...|:.|:|.:::.||:..||..            .....|.||
 Frog   184 MNPDRPKVLNVISLEFSDTKMADLVKVPDISKKLSWVENYWPDD------------SFFTKPFVQ 236

  Fly   230 KYCLMSVKNCYTDFHIDFGGTSVWYHILRGSKVFWLIPPTDRNLQLYEKWVLSGKQADIFFGDTV 294
            |||||.|::.||||||||||||||||:|.|.|||:||.|:|.||.|||.|..|..|::.||||.|
 Frog   237 KYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKVFYLIKPSDENLALYESWSSSVTQSEEFFGDKV 301

  Fly   295 EKCARVYLTAGNTFFIPTGWIHAVYTPTQSLVFGGNFLHSFGIVKQLKTASVEDSTKVPQKFRYP 359
            :||.:..:..|:|.|:||||||||.|....:.|||||||:..|..||:...:|...|.|..|::|
 Frog   302 DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFP 366

  Fly   360 FFTEMLWYVLARYVHTLLGHSHLEGEASLSEDEMAARPHTHLTHHELFGLKEIVMYL-------- 416
            ||..:.|:|....:.||         ..|.||  ...|..:|.|    |:|.::..|        
 Frog   367 FFEAICWFVAKNLLETL---------KELKED--GFHPPNYLKH----GVKALISALKSWMKKES 416

  Fly   417 -----YDLPPQKKNVPSLVLDPVALIKD----VRSLVER------------HC------------ 448
                 :::|..        :.|..|||:    :||:.|.            ||            
 Frog   417 VAEHAFEIPDN--------IRPGHLIKELSKVIRSVEEEGNRPVKSQGIHGHCPVSRSSHEKSSH 473

  Fly   449 ---------KDQQDLAITGVSVLK------------SP----PG--------SQPPFLLYDRTRV 480
                     :|......|.:.:|:            ||    .|        ::|  ||...|..
 Frog   474 HSGRKARRLRDHSTKTPTNLDILEHHTREVLKRLEMSPWEEDAGTYKLNMRFNKP--LLPSSTEP 536

  Fly   481 KQEIKQEIAR---KNAEVIREQQQLEAGRA-----REAESDTSQSTGVGSVIGMGAGVEYSNGVM 537
            .|:::....|   .|..:||:::|....|:     .|.|.|.::|.....:              
 Frog   537 DQKVRDNGIRLLLSNGRIIRDERQPFTDRSLYTADSEDEDDRARSRKAKDI-------------- 587

  Fly   538 KKEQLENGSGVTVGGHGSQPEATFALPTDTLKYRPPKKMHLATALVAAAASSSSGGGGPVAGVGG 602
            |:|:..:.||:                .|..:.:.|..|     ...:..|....|....:.:..
 Frog   588 KQEKPCSTSGM----------------EDKAETQKPLNM-----FFESVKSELRNGSSEYSDISD 631

  Fly   603 SAVVGSSHSPTGGGVGPVTGAGGAISVIATSSSYIEGGQVGG----------------ILNMDNC 651
            |.  ||..:.|                  ....:.|..:..|                |.|:...
 Frog   632 SE--GSEDNCT------------------NQKHFSEESESSGDDDDEEEEEEEERQEPIRNLKEE 676

  Fly   652 HSPEGGGAKL--SPNL--TGTGQPRRRRTRCKNCAACQRSDCGTCPFCMDMVKFGGPGRAKQTCM 712
            ||    |.:|  .||.  .....|::|.                ||              ..|.|
 Frog   677 HS----GRRLPCDPNFPWPDHDSPQKRE----------------CP--------------TSTSM 707

  Fly   713 MRQCLSPMLPVTAQCVYCHLDGWRQTPVSPQTKQLASADGPSALMECSVCYEIAHPDCALSQLDG 777
            .::.:..||                        .:||...|||                      
 Frog   708 EQEAVQGML------------------------SMASLHYPSA---------------------- 726

  Fly   778 TEDAADAKGIVNEDLPNSWECPSC-CRSGKNYDYKPRHFRARQKSSEVRRVSVSHGQGGAEGHA- 840
                          ||...:...| .|.|    |...|.|..|.:.:....|.||....::.|. 
 Frog   727 --------------LPTPAKSTDCNIRGG----YPQLHIRVSQGNGKEHLDSHSHKAANSDHHVK 773

  Fly   841 --------------DGNTLLPP------PVGQYNDFVFTSESEMESGTVSGH---MTHWKHGMKR 882
                          |.:..|.|      |.....:|   :..|.|......|   :.||.....:
 Frog   774 DEGEFSALDWIRQPDASCRLSPQDSCQVPQSLRREF---AHEEYEKAPEDKHYLEIEHWDSAEYQ 835

  Fly   883 HHQLEVKTERNN-SCDTPSPGISPNAIGGDSKVGKRRKSDDGTSVSSSMH-----ESNDAPCGSS 941
            ..:.:.::..:: .|......:||..|.||            |:.:..:|     .||..|..:.
 Frog   836 PEKYDPESSMSSGECHLSDGSLSPTRIYGD------------TAAAVPLHPTKRPASNPPPISNQ 888

  Fly   942 A 942
            |
 Frog   889 A 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm2NP_649864.2 cupin_RmlC-like 231..331 CDD:477354 60/99 (61%)
CTD_Jhd1-like 399..465 CDD:412024 18/127 (14%)
zf-CXXC 670..716 CDD:366873 6/45 (13%)
PHD_4 721..802 CDD:465288 9/81 (11%)
F-box-like <1073..1105 CDD:463757
leucine-rich repeat 1102..1125 CDD:275381
leucine-rich repeat 1126..1149 CDD:275381
leucine-rich repeat 1150..1173 CDD:275381
AMN1 1166..>1320 CDD:187754
leucine-rich repeat 1174..1213 CDD:275381
leucine-rich repeat 1214..1238 CDD:275381
leucine-rich repeat 1239..1267 CDD:275381
leucine-rich repeat 1268..1292 CDD:275381
leucine-rich repeat 1293..1317 CDD:275381
kdm7aNP_001072664.1 PHD_KDM7 8..57 CDD:277110
JmjC 203..266 CDD:214721 33/74 (45%)
cupin_RmlC-like 238..338 CDD:477354 60/99 (61%)
JHD 342..445 CDD:465515 30/125 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 445..490 4/44 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 565..607 10/71 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 622..711 21/142 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 754..773 4/18 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 872..902 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.

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