DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm2 and kdm7ab

DIOPT Version :10

Sequence 1:NP_649864.2 Gene:Kdm2 / 41090 FlyBaseID:FBgn0037659 Length:1345 Species:Drosophila melanogaster
Sequence 2:XP_005174379.2 Gene:kdm7ab / 503902 ZFINID:ZDB-GENE-050309-32 Length:920 Species:Danio rerio


Alignment Length:479 Identity:164/479 - (34%)
Similarity:244/479 - (50%) Gaps:82/479 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 RKQRKLYLEEWSLGDEDGEGTR-GFSV-AEKLESSKFAQAG-MVREMRGCDLTVAFLQQHGFNIP 108
            :|:|..:..:::..|:..:..: |.|| ..:|::..|.... :::.|.|..:|..:|::|||..|
Zfish    63 KKRRNWHRHDYTEPDDGSKPVQAGTSVFVRELQARTFPSGDEILQPMHGGQVTQRYLERHGFRYP 127

  Fly   109 LLFRDKAGLGLRMPDPQEFTVNDVRLCVGSRRLLDVMDVNTQKNLQMTMKEWQQYYDSPQKDRLL 173
            ::...:..||||:| |.:|::.||...||..:::||:||..|.:.:|.:|.:.:||.|||:.::|
Zfish   128 IIVSKREELGLRLP-PPDFSIKDVERYVGGNKVIDVIDVARQADSKMKLKAFVKYYYSPQRPKVL 191

  Fly   174 NVISLEFSHTRLDRFVQSPEIVRQIDWVDVVWPKQLKDAQREGTNLLGGMMYPK--VQKYCLMSV 236
            ||||||||.|::...|..|:|.:::.||:..||..              ..:||  |||||||.|
Zfish   192 NVISLEFSDTKMAELVVVPDIAQKMSWVENYWPDD--------------SYFPKPFVQKYCLMGV 242

  Fly   237 KNCYTDFHIDFGGTSVWYHILRGSKVFWLIPPTDRNLQLYEKWVLSGKQADIFFGDTVEKCARVY 301
            |:.||||||||||||||||:|.|.|:|:||.||..||.|||:|..|..|:::|||:.|:||.:..
Zfish   243 KDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTPANLALYEEWSSSPNQSEVFFGEKVDKCYKCV 307

  Fly   302 LTAGNTFFIPTGWIHAVYTPTQSLVFGGNFLHSFGIVKQLKTASVEDSTKVPQKFRYPFFTEMLW 366
            :..|.|..|||||||||.|....:.|||||||:..|..||:...:|...|.|..|::|:|..:.|
Zfish   308 VRQGTTLLIPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMERRLKTPDLFKFPYFEAICW 372

  Fly   367 YVLARYVHTLLGHSHLEGEASLSEDEMAARPHTHLTHHELFGLKEIVMYLYDLPPQKKNVPSLVL 431
            ||....:.||          ..|.:|..                        |||:     .|:.
Zfish   373 YVAKNLLETL----------KESREENC------------------------LPPE-----YLIK 398

  Fly   432 DPVALIKDVRSLVERHCKDQQDLAITGVSVLKSPPGSQPPFLLYDRTRVKQEIKQEIARKNAEVI 496
            ...|||..:|:.::|...:               |.|:.|    |..|....||  :..|..:.:
Zfish   399 GVKALITALRNWLKREVTE---------------PASEVP----DHIRPNHLIK--MLTKEIQYL 442

  Fly   497 REQQQLEAGR--AREAESDTSQST 518
            .|.|....|.  .:..||....||
Zfish   443 EEYQNGNCGNKPMKLQESSICPST 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm2NP_649864.2 cupin_RmlC-like 231..331 CDD:477354 59/99 (60%)
CTD_Jhd1-like 399..465 CDD:412024 9/65 (14%)
zf-CXXC 670..716 CDD:366873
PHD_4 721..802 CDD:465288
F-box-like <1073..1105 CDD:463757
leucine-rich repeat 1102..1125 CDD:275381
leucine-rich repeat 1126..1149 CDD:275381
leucine-rich repeat 1150..1173 CDD:275381
AMN1 1166..>1320 CDD:187754
leucine-rich repeat 1174..1213 CDD:275381
leucine-rich repeat 1214..1238 CDD:275381
leucine-rich repeat 1239..1267 CDD:275381
leucine-rich repeat 1268..1292 CDD:275381
leucine-rich repeat 1293..1317 CDD:275381
kdm7abXP_005174379.2 None
Blue background indicates that the domain is not in the aligned region.

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