DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm2 and CG14891

DIOPT Version :9

Sequence 1:NP_001262400.1 Gene:Kdm2 / 41090 FlyBaseID:FBgn0037659 Length:1345 Species:Drosophila melanogaster
Sequence 2:NP_650560.1 Gene:CG14891 / 42013 FlyBaseID:FBgn0038445 Length:495 Species:Drosophila melanogaster


Alignment Length:277 Identity:60/277 - (21%)
Similarity:102/277 - (36%) Gaps:74/277 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1048 GSNGLGNQHYSSSQNLALDPTVLKIIFRYLPQDTLVTCCSVCK------VWSNAAVDPDLWKKMN 1106
            |:|||.|     ..|::|....||        |..:.|..:..      :..|.::..|..|.:.
  Fly   232 GANGLIN-----ITNISLRRCNLK--------DAHIYCLQMLSKLKSLDIRENFSIKGDSLKSLP 283

  Fly  1107 CSEHKMSASLLTAIVRRQPEHLILDWTQIAK----RQLAWLVARLPALKNLSLQN---------C 1158
            .|...::.|   ..|...|:.||    |:|.    |:|     |.|.:...:..|         |
  Fly   284 ISLEILNVS---GCVDLSPKCLI----QLAALSHLREL-----RCPGIVKFAKDNELYGRLAHYC 336

  Fly  1159 PIQAVL---------------ALHTCLCPPLQTLD----------LSFVRGLNDAAIRDILSPPK 1198
            |:..||               .|||.:......||          ::....|....|.|...|..
  Fly   337 PMLEVLELTDFMNVIQLGGLSRLHTLVIHSSAQLDYHVNNVLLTSIAESYSLRHLEILDSFGPMS 401

  Fly  1199 DSRPGLSDSKTRLRDLKVMKLAGTDISDVAVRYITQSLPYLRHLDLSSCQRITDAGVAQIGTSTT 1263
            |:...|| ..::|::|:.:.|...:.:.:.:..: |.|..|..||||....:::..||::   |.
  Fly   402 DTSFDLS-IFSQLKELRTLILHNQNFTTLHLMGL-QKLSTLEFLDLSGSPNLSNEVVAKL---TK 461

  Fly  1264 ATARLTELNLSACRLVS 1280
            :.:.|..|.:..|.|::
  Fly   462 SLSGLRRLKVDFCPLIT 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm2NP_001262400.1 cupin_like 231..331 CDD:304367
PRTases_typeI <394..>467 CDD:294217
zf-CXXC 670..716 CDD:251032
PHD_4 721..801 CDD:293471
F-box-like <1073..1108 CDD:289689 5/40 (13%)
leucine-rich repeat 1102..1125 CDD:275381 4/22 (18%)
leucine-rich repeat 1126..1149 CDD:275381 7/26 (27%)
leucine-rich repeat 1150..1173 CDD:275381 8/46 (17%)
AMN1 1166..>1320 CDD:187754 29/125 (23%)
leucine-rich repeat 1174..1213 CDD:275381 10/48 (21%)
leucine-rich repeat 1214..1238 CDD:275381 4/23 (17%)
leucine-rich repeat 1239..1267 CDD:275381 8/27 (30%)
leucine-rich repeat 1268..1292 CDD:275381 4/13 (31%)
leucine-rich repeat 1293..1317 CDD:275381
CG14891NP_650560.1 RRM_6 25..91 CDD:290958
AMN1 <199..352 CDD:187754 31/144 (22%)
leucine-rich repeat 211..237 CDD:275381 3/4 (75%)
leucine-rich repeat 239..262 CDD:275381 6/30 (20%)
leucine-rich repeat 263..285 CDD:275381 3/21 (14%)
leucine-rich repeat 286..338 CDD:275381 13/63 (21%)
leucine-rich repeat 339..387 CDD:275381 7/47 (15%)
leucine-rich repeat 388..415 CDD:275381 8/27 (30%)
leucine-rich repeat 416..439 CDD:275381 4/23 (17%)
leucine-rich repeat 440..465 CDD:275381 8/27 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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