Sequence 1: | NP_001262400.1 | Gene: | Kdm2 / 41090 | FlyBaseID: | FBgn0037659 | Length: | 1345 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001265645.1 | Gene: | FBXL4 / 26235 | HGNCID: | 13601 | Length: | 621 | Species: | Homo sapiens |
Alignment Length: | 344 | Identity: | 87/344 - (25%) |
---|---|---|---|
Similarity: | 124/344 - (36%) | Gaps: | 85/344 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 1030 NSCGAGN----------GERGTNNGGLSGSNGLGNQHYSSSQNLALDPTVLKIIFRYLPQDTLVT 1084
Fly 1085 CCSVCKVWSNAAVDP---------DLWKKMNCSEHKMSASLLTAIVRRQPEHLILDWT------Q 1134
Fly 1135 IA--KRQLAWLVARLPALKNLSLQNCPIQAVLALHTCLCPPLQTLDLSFVRGLNDAAIRDILSPP 1197
Fly 1198 KDSRPGLSDSKTRLRDLKVMKLAGTDISDVAVRYITQSLPYLRHLDLSSCQRITDAGV--AQIGT 1260
Fly 1261 STTATARLTELNLSACRLVSENALEHLAK-CEGLIWLDLRHVP--QVSTQSVIRFASNSKHDLCV 1322
Fly 1323 RDIKLVERRRRNSTTANRS 1341 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Kdm2 | NP_001262400.1 | cupin_like | 231..331 | CDD:304367 | |
PRTases_typeI | <394..>467 | CDD:294217 | |||
zf-CXXC | 670..716 | CDD:251032 | |||
PHD_4 | 721..801 | CDD:293471 | |||
F-box-like | <1073..1108 | CDD:289689 | 10/43 (23%) | ||
leucine-rich repeat | 1102..1125 | CDD:275381 | 4/22 (18%) | ||
leucine-rich repeat | 1126..1149 | CDD:275381 | 8/30 (27%) | ||
leucine-rich repeat | 1150..1173 | CDD:275381 | 5/22 (23%) | ||
AMN1 | 1166..>1320 | CDD:187754 | 48/158 (30%) | ||
leucine-rich repeat | 1174..1213 | CDD:275381 | 9/38 (24%) | ||
leucine-rich repeat | 1214..1238 | CDD:275381 | 6/23 (26%) | ||
leucine-rich repeat | 1239..1267 | CDD:275381 | 11/29 (38%) | ||
leucine-rich repeat | 1268..1292 | CDD:275381 | 9/24 (38%) | ||
leucine-rich repeat | 1293..1317 | CDD:275381 | 10/25 (40%) | ||
FBXL4 | NP_001265645.1 | F-box-like | 280..318 | CDD:315592 | 8/53 (15%) |
leucine-rich repeat | 295..317 | CDD:275381 | 5/21 (24%) | ||
leucine-rich repeat | 318..346 | CDD:275381 | 3/27 (11%) | ||
leucine-rich repeat | 347..376 | CDD:275381 | 7/33 (21%) | ||
LRR 1 | 376..397 | 5/21 (24%) | |||
leucine-rich repeat | 377..398 | CDD:275381 | 5/21 (24%) | ||
AMN1 | 394..601 | CDD:332986 | 54/182 (30%) | ||
LRR 2 | 402..421 | 7/18 (39%) | |||
leucine-rich repeat | 403..427 | CDD:275381 | 9/38 (24%) | ||
LRR 3 | 427..448 | 6/20 (30%) | |||
leucine-rich repeat | 428..452 | CDD:275381 | 6/23 (26%) | ||
LRR 4 | 452..474 | 9/21 (43%) | |||
leucine-rich repeat | 453..480 | CDD:275381 | 11/29 (38%) | ||
LRR 5 | 480..501 | 6/20 (30%) | |||
leucine-rich repeat | 481..506 | CDD:275381 | 9/24 (38%) | ||
LRR 6 | 504..524 | 9/19 (47%) | |||
leucine-rich repeat | 507..534 | CDD:275381 | 12/38 (32%) | ||
LRR 7 | 532..558 | 6/22 (27%) | |||
leucine-rich repeat | 535..560 | CDD:275381 | 5/11 (45%) | ||
LRR 8 | 559..583 | ||||
leucine-rich repeat | 561..586 | CDD:275381 | |||
LRR 9 | 584..609 | ||||
leucine-rich repeat | 587..612 | CDD:275381 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1947 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |