DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm2 and Fbxl19

DIOPT Version :10

Sequence 1:NP_649864.2 Gene:Kdm2 / 41090 FlyBaseID:FBgn0037659 Length:1345 Species:Drosophila melanogaster
Sequence 2:NP_001408690.1 Gene:Fbxl19 / 233902 MGIID:3039600 Length:696 Species:Mus musculus


Alignment Length:758 Identity:217/758 - (28%)
Similarity:324/758 - (42%) Gaps:182/758 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   650 NCHSPEGGGAKLSPNLTGTGQ-----PRRRRTRCKNCAACQRSDCGTCPFCMDMVKFGGPGRAKQ 709
            :|.|.: ..|.|:|.::.:.:     .|||||||:.|.||.|::||.|.||.||.|||||||.||
Mouse     9 DCDSRQ-PSALLTPPMSSSSRGPGAGARRRRTRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQ 72

  Fly   710 TCMMRQCLSPMLPVTAQCVYCHLDGWRQTPVSPQTKQLASADGPSALMECSVCYEIAHPDCALSQ 774
            :|::|||.:|:||.||.|:.|...|...|......|...|      ||||::|.||.||.|.   
Mouse    73 SCLLRQCTAPVLPHTAVCLLCGEAGKEDTVEGEDEKFSLS------LMECTICNEIVHPGCL--- 128

  Fly   775 LDGTEDAADAKGIVNEDLPNSWECPSCCRSGKNYDYKPRHFRARQKSSEVRRVSVSHGQGGAEGH 839
                 ....|:|::|.::||.||||.|.:.|                    |.|...|:|.....
Mouse   129 -----KMGKAEGVINSEIPNCWECPRCTQEG--------------------RTSKDAGEGPGRRR 168

  Fly   840 ADGN------------TLLPP------------PVGQYNDFV--FTSESEMESGT--------VS 870
            ||..            |..||            |.|...|.|  .....|.|.|.        |.
Mouse   169 ADNGEEGANLGGGWKLTEEPPPPPPLPRRKGPLPAGPTPDDVPGPPKRKEREGGNEPPTPRKKVK 233

  Fly   871 GHMTHWKHGMKRHHQLEVKTERNNSC-----DTPSPGISPNAIGGDSKVGKRRKSDDGTSVSSSM 930
            |       |.:||    :|....::|     |..|||:.|..:...|:            ..||.
Mouse   234 G-------GRERH----LKKVGGDACLLRGADPGSPGLLPPRVLNPSQ------------AFSSC 275

  Fly   931 HE-------SNDAPCGSSAEGAGGAGNANVSTNQWSGSGGGGGSRKKNSIRSQLAQQMLNSSTRV 988
            |.       ....|..:||||.                          ::.|...|:   .....
Mouse   276 HPGLPPENWEKPKPPIASAEGP--------------------------AVPSPSPQR---EKLER 311

  Fly   989 LKKPQYVVRPASGTGSSSSSGNGGSASATNGISN----GSNQSGANSCGAGNGERGTNNGG---- 1045
            .|:...::.....|.||||..:..|.|:...:|.    |..::|.......:||: .|.||    
Mouse   312 FKRMCQLLERVPDTSSSSSDSDSDSDSSGTSLSEDEAPGEARNGRRPARGSSGEK-ENRGGRRAI 375

  Fly  1046 LSGSNG------LG----------NQHYSSSQNLALDPTVLKI---------------IFRYLPQ 1079
            ..|:.|      ||          .:|.......:.:|..|.:               :|::|..
Mouse   376 RPGTGGPLLSWPLGPAPPPRPPQLERHVVRPPPRSPEPDTLPLAAGSDHPLPRAAWLRVFQHLGP 440

  Fly  1080 DTLVTCCSVCKVWSNAAVDPDLWKKMNCSEHK-MSASLLTAIVRRQPEHLILDWTQIAKRQLAWL 1143
            ..|..|..||:.||....|..||.:|:.|..| ::..:|:.:|||||..|.|.||.::|:||.||
Mouse   441 RELCVCMRVCRTWSRWCYDKRLWPRMDLSRRKSLTPPMLSGVVRRQPRALDLSWTGVSKKQLMWL 505

  Fly  1144 VARLPALKNLSLQNCPIQAVLALHTCLCPPLQTLDLSFVRGLNDAAIRDILSPPKDSRPGLSDSK 1208
            :.||..|:.|.|..|...:|.||.:...|.|:.|||.::..:.|:.:|::|.||.|::||.::|:
Mouse   506 LNRLQGLQELVLSGCSWLSVSALGSAPLPALRLLDLRWIEDVKDSQLRELLLPPPDTKPGQTESR 570

  Fly  1209 TRLRDLKVMKLAGTDISDVAVRYITQSLPYLRHLDLSSCQRITDAGVAQIGTSTTATAR--LTEL 1271
            .||:.:..::|||.:::|.::|.:.:..|.|..||||.|..:.|..| .:.|:.|:..|  |..|
Mouse   571 GRLQGVAELRLAGLELTDASLRLLLRHAPQLSALDLSHCAHVGDPSV-HLLTAPTSPLRETLVHL 634

  Fly  1272 NLSACRLVSENALEHLAKCEGLIWLDLRHVPQVSTQSVIRFAS 1314
            ||:.|..::::.|....:|..|..||||...|:|.::..|.|:
Mouse   635 NLAGCHRLTDHCLPLFRRCPRLRRLDLRSCRQLSPEACARLAA 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm2NP_649864.2 cupin_RmlC-like 231..331 CDD:477354
CTD_Jhd1-like 399..465 CDD:412024
zf-CXXC 670..716 CDD:366873 29/50 (58%)
PHD_4 721..802 CDD:465288 29/80 (36%)
F-box-like <1073..1105 CDD:463757 11/31 (35%)
leucine-rich repeat 1102..1125 CDD:275381 8/23 (35%)
leucine-rich repeat 1126..1149 CDD:275381 11/22 (50%)
leucine-rich repeat 1150..1173 CDD:275381 7/22 (32%)
AMN1 1166..>1320 CDD:187754 50/151 (33%)
leucine-rich repeat 1174..1213 CDD:275381 15/38 (39%)
leucine-rich repeat 1214..1238 CDD:275381 5/23 (22%)
leucine-rich repeat 1239..1267 CDD:275381 10/27 (37%)
leucine-rich repeat 1268..1292 CDD:275381 7/23 (30%)
leucine-rich repeat 1293..1317 CDD:275381 9/22 (41%)
Fbxl19NP_001408690.1 zf-CXXC <52..79 CDD:366873 18/26 (69%)
PHD_FXL19 89..150 CDD:277115 25/74 (34%)
F-box_JHDM 423..465 CDD:438894 11/41 (27%)
AMN1 468..667 CDD:187754 71/199 (36%)
leucine-rich repeat 488..511 CDD:275381 11/22 (50%)
leucine-rich repeat 512..535 CDD:275381 7/22 (32%)
leucine-rich repeat 573..600 CDD:275381 6/26 (23%)
leucine-rich repeat 601..627 CDD:275381 10/26 (38%)
leucine-rich repeat 631..655 CDD:275381 7/23 (30%)
leucine-rich repeat 656..680 CDD:275381 9/22 (41%)
Blue background indicates that the domain is not in the aligned region.

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