DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kdm2 and Kdm2

DIOPT Version :10

Sequence 1:NP_649864.2 Gene:Kdm2 / 41090 FlyBaseID:FBgn0037659 Length:1345 Species:Drosophila melanogaster
Sequence 2:XP_061502317.1 Gene:Kdm2 / 1281229 VectorBaseID:AGAMI1_004393 Length:1366 Species:Anopheles gambiae


Alignment Length:1453 Identity:757/1453 - (52%)
Similarity:905/1453 - (62%) Gaps:265/1453 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PNAKGVQRRQLRERKQRKLYLEEWSLGDEDGEGTRGFSVAEKLESSKFAQAGMVREMRGCDLTVA 98
            |.:....|||||||||:|||.::|:|||:|.||.|||||||||||.:|||:||||||:|.:|||.
Mosquito     8 PISPSKSRRQLRERKQKKLYSDDWTLGDDDYEGARGFSVAEKLESPRFAQSGMVREMKGENLTVG 72

  Fly    99 FLQQHGFNIPLLFRDKAGLGLRMPDPQEFTVNDVRLCVGSRRLLDVMDVNTQKNLQMTMKEWQQY 163
            |||.:||||||||::|.||||::| ...|:::|||:||||||:|||||||||||::||||||::|
Mosquito    73 FLQHNGFNIPLLFKEKTGLGLQVP-TANFSISDVRMCVGSRRMLDVMDVNTQKNVEMTMKEWEKY 136

  Fly   164 YDSPQKDRLLNVISLEFSHTRLDRFVQSPEIVRQIDWVDVVWPKQLKDAQREGTNLLGGMMYPKV 228
            |:.|.|.:||||||||||||:|:.:||||.|||||||||||||||||::|.|.||||..||||||
Mosquito   137 YEDPVKKKLLNVISLEFSHTKLENYVQSPAIVRQIDWVDVVWPKQLKESQVESTNLLNDMMYPKV 201

  Fly   229 QKYCLMSVKNCYTDFHIDFGGTSVWYHILRGSKVFWLIPPTDRNLQLYEKWVLSGKQADIFFGDT 293
            ||||||||||||||||:|||||||||||||||||||||||||:||||||||||||||:|:|||||
Mosquito   202 QKYCLMSVKNCYTDFHVDFGGTSVWYHILRGSKVFWLIPPTDKNLQLYEKWVLSGKQSDVFFGDT 266

  Fly   294 VEKCARVYLTAGNTFFIPTGWIHAVYTPTQSLVFGGNFLHSFGIVKQLKTASVEDSTKVPQKFRY 358
            |||||||||||||||||||||||||||||.|||||||||||||||||||...|||:|||||||||
Mosquito   267 VEKCARVYLTAGNTFFIPTGWIHAVYTPTDSLVFGGNFLHSFGIVKQLKITQVEDNTKVPQKFRY 331

  Fly   359 PFFTEMLWYVLARYVHTLLGHSHLEGEASLSEDEMAARPHTHLTHHELFGLKEIVMYLYDLPPQK 423
            ||||||||||||:||:|||||||||||.. .|.|:..:||.||||:||||||:|||||||||.||
Mosquito   332 PFFTEMLWYVLAKYVYTLLGHSHLEGEPG-REHELVGKPHVHLTHYELFGLKDIVMYLYDLPAQK 395

  Fly   424 KNVPSLVLDPVALIKDVRSLVERHCKDQQDLAITGVSVL-------------------------- 462
            ||||.|:.||||||||||:||||||||..:||:|||.||                          
Mosquito   396 KNVPELIKDPVALIKDVRTLVERHCKDIPELAVTGVPVLHPDLNVSNNSYIREHYEYYSGDGGGN 460

  Fly   463 -----KSPPGSQPPFLLYDRTRVKQEIKQEIARKNAEVIREQQQLEAGRAREAESDTSQSTGVGS 522
                 :.|..|:       |.|.:.|...|...:.||..|.....|..|.:|.|.......|   
Mosquito   461 RTTDNEGPRDSR-------RDRDEDEEDDEEGVEEAENRRRNADHERQRLQEVEQQEGNKNG--- 515

  Fly   523 VIGMGAGVEYSNGVMKKEQLENGSGVTV------GGHGSQPEATFALPTDTLKYRPPKKMHLATA 581
                            ..::.||...:|      ..|..||.....:.....:.:..::.|..:.
Mosquito   516 ----------------DNRMGNGGSESVAEAHLQSPHAQQPHRQVIVEQQQQQQQDQQQNHSQSR 564

  Fly   582 LVAAAASSSSGGGGPVAGVGGSAVVGSSHSPTGGGVGPVT------------GAG---GAISVIA 631
            ...|...|....|....|...    |:|.||.|...|..|            |.|   ..:|...
Mosquito   565 HSHAVPRSREQSGETADGDAN----GTSRSPIGSSNGGTTMGPPARYNNHHHGNGDDRNFVSPQP 625

  Fly   632 TSSSYIEGGQVG-GILNMDNCHSPEGGGAKLSPNLTGTGQPRRRRTRCKNCAACQRSDCGTCPFC 695
            ||.:.:....|| |........:...||.|....  |.| |||||||||||.||||||||.|.||
Mosquito   626 TSGNRLPSSGVGRGPYKKHGTGNSGHGGEKRDGG--GNG-PRRRRTRCKNCEACQRSDCGECSFC 687

  Fly   696 MDMVKFGGPGRAKQTCMMRQCLSPMLPVTAQCVYCHLDGWRQTPV-SP-QTK-QLASADGPSALM 757
            :|||||||||||||||||||||.|||||||||::|:||||||.|: :| |.| |....:||||||
Mosquito   688 LDMVKFGGPGRAKQTCMMRQCLQPMLPVTAQCIHCNLDGWRQAPIMAPAQAKLQAQMQEGPSALM 752

  Fly   758 ECSVCYEIAHPDCALSQLDGTEDAADAKGIVNEDLPNSWECPSCCRSGKNYDYKPRHFRARQKSS 822
            ||||||||:|||||      ...|.:|:||||:||||||||||||:||||.||:|||||||||||
Mosquito   753 ECSVCYEISHPDCA------QRAAPEAQGIVNDDLPNSWECPSCCKSGKNTDYRPRHFRARQKSS 811

  Fly   823 EVRRVSVS----------------HGQGGA------------EGHADGNTLLPPPVGQYNDFVF- 858
            ::||:|.|                .|.|||            :|...|..:..|...::.|.:. 
Mosquito   812 DIRRMSCSSDASSAHNAEFGRIGGSGHGGAGSGGEGSMNSTGDGMMAGANVSAPRAPRFQDDMLY 876

  Fly   859 -------------------------TSESEMESGT---VSGHMTHWKHGMKRHHQL--------- 886
                                     ..:.:|.||:   .||      .|.|.||.|         
Mosquito   877 DFAVSGSAVIVGSKGGNILFERKPKIKDEDMSSGSEYDASG------VGKKMHHSLNSSPGAGTA 935

  Fly   887 --------EVKTERNNSCDTPSPGISPN-----------------------AIGGDSKVGKRRKS 920
                    |||.|..:  ..|:.|...|                       |...|....|||||
Mosquito   936 MGGGSMKVEVKDEPLD--HHPNHGYPANHHATSVIKDGREMQREQALSSSCAASADGVAVKRRKS 998

  Fly   921 DDGTSVSSSMHESNDAPCGSSAEGAGGAGNANVSTNQWSGSGGGGGSRKKNSIRSQLAQQMLNSS 985
            |:|.::::..|             :||.|......|:...|.||...|||:|.|.|||.|:.::|
Mosquito   999 DEGGAINTHHH-------------SGGTGTGAADGNEAKNSHGGSLPRKKSSQRMQLAHQIHSTS 1050

  Fly   986 TRVLKKPQYVVRPASGTGSSSSSGNGGSASATNGISNGSNQSGANSCGAGNGERGTNNGGLSGSN 1050
            |:.:|||.|.:||||...:.:.|                                     |||  
Mosquito  1051 TKPMKKPLYPIRPASVAHTPTMS-------------------------------------LSG-- 1076

  Fly  1051 GLGNQHYSSSQNLALDPTVLKIIFRYLPQDTLVTCCSVCKVWSNAAVDPDLWKKMNCSEHKMSAS 1115
                       |.|||...|..:|||||.:|||||..|||.|:|.||||.|||:|||:|:|:|.:
Mosquito  1077 -----------NYALDAPCLLAVFRYLPPETLVTCTMVCKTWANIAVDPSLWKRMNCAEYKLSPN 1130

  Fly  1116 LLTAIVRRQPEHLILDWTQIAKRQLAWLVARLPALKNLSLQNCPIQAVLALHTCLCPPLQTLDLS 1180
            ||:|||||||||||:||..:.|||:.||::|:|.|||||||...|||||.||||:|||||.||||
Mosquito  1131 LLSAIVRRQPEHLIMDWIGLGKRQVTWLISRIPGLKNLSLQGTHIQAVLGLHTCMCPPLQVLDLS 1195

  Fly  1181 FVRGLNDAAIRDILSPPKDSRPGLSDSKTRLRDLKVMKLAGTDISDVAVRYITQSLPYLRHLDLS 1245
            |:.||||.|||:||||||||||||:|||:|||:||::|:||.||||||:|||||.||.|.|||||
Mosquito  1196 FIAGLNDFAIREILSPPKDSRPGLADSKSRLRNLKMLKVAGADISDVALRYITQGLPNLTHLDLS 1260

  Fly  1246 SCQRITDAGVAQIGTSTTATARLTELNLSACRLVSENALEHLAKCEGLIWLDLRHVPQVSTQSVI 1310
            ||||||||.:||||||..|...|.||:||.|:|::|.:|:|||||:.|..|||.|||||||||:|
Mosquito  1261 SCQRITDAAIAQIGTSPAAIKTLVELDLSCCKLITELSLDHLAKCDALTRLDLSHVPQVSTQSMI 1325

  Fly  1311 RFASNSKHDLCVRDIKLVERRRR 1333
            :|||.||:||.:.|||||::|::
Mosquito  1326 KFASISKNDLQLHDIKLVDKRKQ 1348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm2NP_649864.2 cupin_RmlC-like 231..331 CDD:477354 94/99 (95%)
CTD_Jhd1-like 399..465 CDD:412024 51/96 (53%)
zf-CXXC 670..716 CDD:366873 40/45 (89%)
PHD_4 721..802 CDD:465288 54/83 (65%)
F-box-like <1073..1105 CDD:463757 22/31 (71%)
leucine-rich repeat 1102..1125 CDD:275381 15/22 (68%)
leucine-rich repeat 1126..1149 CDD:275381 12/22 (55%)
leucine-rich repeat 1150..1173 CDD:275381 17/22 (77%)
AMN1 1166..>1320 CDD:187754 111/153 (73%)
leucine-rich repeat 1174..1213 CDD:275381 31/38 (82%)
leucine-rich repeat 1214..1238 CDD:275381 17/23 (74%)
leucine-rich repeat 1239..1267 CDD:275381 21/27 (78%)
leucine-rich repeat 1268..1292 CDD:275381 14/23 (61%)
leucine-rich repeat 1293..1317 CDD:275381 17/23 (74%)
Kdm2XP_061502317.1 None

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