Sequence 1: | NP_001262400.1 | Gene: | Kdm2 / 41090 | FlyBaseID: | FBgn0037659 | Length: | 1345 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031748792.1 | Gene: | fbxl19 / 100486811 | XenbaseID: | XB-GENE-994853 | Length: | 676 | Species: | Xenopus tropicalis |
Alignment Length: | 728 | Identity: | 206/728 - (28%) |
---|---|---|---|
Similarity: | 317/728 - (43%) | Gaps: | 154/728 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 669 GQPRRRRTRCKNCAACQRSDCGTCPFCMDMVKFGGPGRAKQTCMMRQCLSPMLPVTAQCVYCHLD 733
Fly 734 GWRQTPVSPQTKQLASADGPSALMECSVCYEIAHPDCALSQLDGTEDAADAKGIVNEDLPNSWEC 798
Fly 799 PSCCRSGK-NYDYKPRHFRARQKSSE--VRRVSVSHGQGGAEGHADGNTLLPPPVGQYNDFVFTS 860
Fly 861 ESEMESGTVSGHMTHWKHGMKRHHQLEVKTERNNSCDTPSPGISPNAIGGDSKVGKRRKSDDGTS 925
Fly 926 V--------SSSMHESNDAPCGSSAEGAGGAGNANVSTNQWSGSGGGGGSRKKNSIRSQLAQQML 982
Fly 983 NSSTRVLKKPQYVVRPASGTGSSSSSGNGGSASATNGISNG------------SNQSGANSCGAG 1035
Fly 1036 NGERGTNNGGLSGSNGLGNQHYSSSQNL--------------------------ALDPTVLKI-- 1072
Fly 1073 -------------IFRYLPQDTLVTCCSVCKVWSNAAVDPDLWKKMNCSEHK-MSASLLTAIVRR 1123
Fly 1124 QPEHLILDWTQIAKRQLAWLVARLPALKNLSLQNCPIQAVLALHTCLCPPLQTLDLSFVRGLNDA 1188
Fly 1189 AIRDILSPP-KDSRPGLSDSKTRLRDLKVMKLAGTDISDVAVRYITQSLPYLRHLDLSSCQRITD 1252
Fly 1253 AGVAQIGTSTTATARLTELNLSACRLVSENALEHLAKCEGLIWLDLRHVPQVSTQSVIRFASNSK 1317
Fly 1318 HD------LCVRD 1324 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Kdm2 | NP_001262400.1 | cupin_like | 231..331 | CDD:304367 | |
PRTases_typeI | <394..>467 | CDD:294217 | |||
zf-CXXC | 670..716 | CDD:251032 | 29/45 (64%) | ||
PHD_4 | 721..801 | CDD:293471 | 27/79 (34%) | ||
F-box-like | <1073..1108 | CDD:289689 | 12/34 (35%) | ||
leucine-rich repeat | 1102..1125 | CDD:275381 | 8/23 (35%) | ||
leucine-rich repeat | 1126..1149 | CDD:275381 | 11/22 (50%) | ||
leucine-rich repeat | 1150..1173 | CDD:275381 | 8/22 (36%) | ||
AMN1 | 1166..>1320 | CDD:187754 | 47/160 (29%) | ||
leucine-rich repeat | 1174..1213 | CDD:275381 | 15/39 (38%) | ||
leucine-rich repeat | 1214..1238 | CDD:275381 | 7/23 (30%) | ||
leucine-rich repeat | 1239..1267 | CDD:275381 | 8/27 (30%) | ||
leucine-rich repeat | 1268..1292 | CDD:275381 | 8/23 (35%) | ||
leucine-rich repeat | 1293..1317 | CDD:275381 | 4/23 (17%) | ||
fbxl19 | XP_031748792.1 | zf-CXXC | <35..71 | CDD:366873 | 22/35 (63%) |
PHD_FXL19 | 81..142 | CDD:277115 | 23/74 (31%) | ||
F-box-like | 406..443 | CDD:403981 | 12/36 (33%) | ||
leucine-rich repeat | 439..463 | CDD:275381 | 8/23 (35%) | ||
AMN1 | 444..644 | CDD:187754 | 72/199 (36%) | ||
leucine-rich repeat | 464..487 | CDD:275381 | 11/22 (50%) | ||
leucine-rich repeat | 512..552 | CDD:275381 | 15/39 (38%) | ||
leucine-rich repeat | 553..577 | CDD:275381 | 7/23 (30%) | ||
leucine-rich repeat | 578..606 | CDD:275381 | 8/27 (30%) | ||
leucine-rich repeat | 607..631 | CDD:275381 | 8/23 (35%) | ||
leucine-rich repeat | 632..651 | CDD:275381 | 4/18 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 125 | 1.000 | Domainoid score | I5394 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D165446at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000253 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |