DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rel and bcl3

DIOPT Version :10

Sequence 1:NP_477094.1 Gene:Rel / 41087 FlyBaseID:FBgn0014018 Length:971 Species:Drosophila melanogaster
Sequence 2:XP_694014.5 Gene:bcl3 / 565656 ZFINID:ZDB-GENE-061013-1 Length:619 Species:Danio rerio


Alignment Length:551 Identity:114/551 - (20%)
Similarity:202/551 - (36%) Gaps:176/551 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   434 ERSFPALPFRYKPRSVIVSRKRRRTGSSANSSSSG--TESSNNSLDLPKTLGLAQPPNGLPNLS- 495
            :.||..||.|.:|..|.|...   |..|.|.|...  .|.::...|.......:.||...|.:| 
Zfish   108 DSSFSKLPIRKRPFPVDVDHD---TSVSHNQSPKVLIPEETHRDADARLIFNTSCPPYRYPCISW 169

  Fly   496 -QHDQTISEEFGR-EKHLNEFIASEDFRKLIEHNS---SDLEKICQLDMGELQHDGHNRAEVPSH 555
             ||       :|. :|.::..:.:.....|:|...   :|:....:.|     .||    :.|.|
Zfish   170 PQH-------YGSPQKPMHMPVPTFSPPSLLESKERLLADIAAATRQD-----EDG----DTPLH 218

  Fly   556 -----RNRTIKCLDDLFEIYKQDRISPIKISHHKVEKWFIEHALNNYN--RDTLLH-EVISHKKD 612
                 .||.:...  |.||::         ..||        .|:.||  |.|.|| .||:|:..
Zfish   219 IAVVQENRALVVW--LIEIFR---------CAHK--------DLDIYNNLRQTPLHLAVITHQPA 264

  Fly   613 KLKLAIQTIQVMNYFNLKDVVN--STLNADGDSALHVACQQDRAHYIRPLLGMGCNPNLKNNAGN 675
            .:|.            |.|..:  ..|:.:|.:|.|:.|:...|..:..:        |::.:.|
Zfish   265 VVKA------------LLDAGSDPGALDRNGQTAQHLCCEHGEAECLSII--------LRHYSHN 309

  Fly   676 TPLHVAVKEEHLSCVESFLNGVPTVQLDLSLTNDDGLTPLHMAIRQNKYDVAKKLISYDRTSISV 740
            .|.||.::                        |.:||||||:|: ||.......::......|:.
Zfish   310 NPSHVEIR------------------------NYEGLTPLHLAV-QNGDQTLTGILLDSGAEINA 349

  Fly   741 ANTMDGNNALHMAVLEQSVELLVLILDAQNENLTDILQAQNAAGHTPLELAERKANDRVVQLLKN 805
            .:...|.:.|..||..:|:::::|::    |...|: .||:.:|:|.|..|..:.:..:|::|  
Zfish   350 GDNKSGRSPLVHAVENKSLDMVLLLI----ERGCDV-NAQSYSGNTALHSACGRGHIEMVRVL-- 407

  Fly   806 VYPEKGELAMTWIPCKVKEEIDSS-SDESSDAGQLEIKSEEM-DI-----------ETKDEDSVE 857
                            :|...||| .:..:|...:..|:::: |:           :|....:..
Zfish   408 ----------------LKNGADSSLKNNHNDTAIMVAKNKKVSDVLRGKGTRSFTGKTISSSNGS 456

  Fly   858 LDLSSG-----------------------PRRQKDE--SSRDTEMDNNKLQLLLKNKFIYDRLCS 897
            |..||.                       ||.|..|  |.|.:.:::|...|.        ::.:
Zfish   457 LSPSSSSHSPRMTPTFQGSASHSPVTPVLPRSQSVESISERHSPLNSNDKALF--------QMQT 513

  Fly   898 LLNQPL----GHGSDPQDRKWMQLARQTHLK 924
            |.:.|:    |:|.  .:..::..:|..|:|
Zfish   514 LHSSPVDNRAGYGF--HNLAYLSPSRYDHIK 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RelNP_477094.1 RHD-n_Relish 150..336 CDD:143644
IPT_NFkappaB 343..446 CDD:238582 5/11 (45%)
ANKYR 590..805 CDD:440430 51/219 (23%)
ANK repeat 640..671 CDD:293786 6/30 (20%)
ANK repeat 673..708 CDD:293786 4/34 (12%)
bcl3XP_694014.5 ANKYR 192..438 CDD:440430 73/341 (21%)
ANK repeat 212..247 CDD:293786 12/57 (21%)
ANK repeat 249..280 CDD:293786 10/42 (24%)
ANK repeat 320..351 CDD:293786 10/31 (32%)
ANK repeat 354..385 CDD:293786 9/35 (26%)
ANK repeat 387..418 CDD:293786 10/48 (21%)
Blue background indicates that the domain is not in the aligned region.

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