DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rel and nfkb2

DIOPT Version :9

Sequence 1:NP_477094.1 Gene:Rel / 41087 FlyBaseID:FBgn0014018 Length:971 Species:Drosophila melanogaster
Sequence 2:NP_001005032.1 Gene:nfkb2 / 448550 XenbaseID:XB-GENE-970084 Length:946 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RelNP_477094.1 RHD-n_Relish 150..336 CDD:143644
IPT_NFkappaB 343..446 CDD:238582
ANK 638..766 CDD:238125
ANK repeat 640..671 CDD:293786
Ank_4 641..691 CDD:290365
ANK repeat 673..708 CDD:293786
Ank_2 678..775 CDD:289560
nfkb2NP_001005032.1 RHD-n_NFkB2 44..227 CDD:143650
RHD_dimer 235..334 CDD:292797
Ank_4 476..525 CDD:290365
ANK 501..635 CDD:238125
ANK repeat 504..541 CDD:293786
ANK repeat 543..574 CDD:293786
Ank_2 548..642 CDD:289560
ANK 572..703 CDD:238125
ANK repeat 614..645 CDD:293786
Ank_2 620..713 CDD:289560
ANK repeat 648..680 CDD:293786
ANK repeat 682..707 CDD:293786
Death_NFkB2_p100 828..903 CDD:176776
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 228 1.000 Inparanoid score I3381
OMA 1 1.010 - - QHG47610
OrthoDB 1 1.010 - - D391433at33208
OrthoFinder 1 1.000 - - FOG0004970
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24169
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X100
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.080

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