DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hyx and Cdc73

DIOPT Version :10

Sequence 1:NP_649863.1 Gene:hyx / 41086 FlyBaseID:FBgn0037657 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_001019940.1 Gene:Cdc73 / 304832 RGDID:1311766 Length:531 Species:Rattus norvegicus


Alignment Length:555 Identity:322/555 - (58%)
Similarity:398/555 - (71%) Gaps:41/555 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADPLSLLRQYNINKKEIVERDSQIIFGEFSWPKSVKTNYLKYGSGKKGAPREYYTLECLLYLLK 65
            |||.||:||||||.|||||.:..::|||||||||:|||||:.:|:||:|.|||||||:.:|:||.
  Rat     1 MADVLSVLRQYNIQKKEIVVKGDEVIFGEFSWPKNVKTNYVVWGTGKEGQPREYYTLDSILFLLN 65

  Fly    66 NVMLQHSVYVRQCAAEDIPAVNRPDRKELLAYLNGETPTCASIDKSAPLEI----PTQVKRAAEG 126
            ||.|.|.||||:.|.|:||.|.|||||:||.|||||..|.||||:||||||    .|||||||: 
  Rat    66 NVHLSHPVYVRRAATENIPVVRRPDRKDLLGYLNGEASTSASIDRSAPLEIGLQRSTQVKRAAD- 129

  Fly   127 EPSSVEVAAKKARFEETQ-VQKVREQLAARWDVNQKETAVNMDNIKSLSETMSVEKIAAIKAKRL 190
               .|...|||.|.|:.: |:..:|:||||.: ..||..|..:.|:||||.|.||||||||||.:
  Rat   130 ---EVLAEAKKPRIEDEECVRLDKERLAARLE-GHKEGIVQTEQIRSLSEAMLVEKIAAIKAKIM 190

  Fly   191 ANKRTTIKRTDNDEAMGTDLRAILDYDVDSTKDIISRERQWRTRTSILQSTGKIFAKNIFAMLQG 255
            |.||:|||...:|:......|:.:|.:||.|:||:||||.|||||:|||||||.|:|||||:||.
  Rat   191 AKKRSTIKTDLDDDITALKQRSFVDAEVDVTRDIVSRERVWRTRTTILQSTGKNFSKNIFAILQS 255

  Fly   256 IKAREEGRNRPQVPNPIKMPEPARIAKPQPQLSQYNRYDQERFNRQKEETEGFKIDTLGTYHGMS 320
            :|||||||...|.|.|...|....:...||..:.||||||||| :.|||||||||||:||||||:
  Rat   256 VKAREEGRAPEQRPAPNAAPVDPTLRTKQPIPAAYNRYDQERF-KGKEETEGFKIDTMGTYHGMT 319

  Fly   321 LKSVTEGSLAQRKAQANNLPGAPGVIAGAAAGRPKELLPAAQARQLPANGPSKRTSRTPIIIIPS 385
            |||||||:.| ||.|.   |.|..|        |:   |.:|||. |.|  .|:.|||||||||:
  Rat   320 LKSVTEGASA-RKTQT---PAAQPV--------PR---PVSQARP-PPN--QKKGSRTPIIIIPA 366

  Fly   386 ANTSLITMLNAKDILQELRFMSTSDKKLQGCQRECEVLLQRKRNNQ---------TVSYRVIDNP 441
            |.|||||||||||:||:|:|:.:.:||.||||||.|.|:||:::..         ||.|||:|.|
  Rat   367 ATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQRENETLIQRRKDQMQPGGTAISVTVPYRVVDQP 431

  Fly   442 TKLSQQEWQRVVAVFVMGPQWQFKGWPW---EGNPVDIFSKICAFHLCFSEMKLDSNVERWSVTL 503
            .||..|:|.|||||||.||.||||||||   :|:|||||:||.||||.:.|::||.||::|.||:
  Rat   432 LKLMPQDWDRVVAVFVQGPAWQFKGWPWLLPDGSPVDIFAKIKAFHLKYDEVRLDPNVQKWDVTV 496

  Fly   504 LRLSQNKRHMDRAVLSKFWETLDKYIAKYKPDLRY 538
            |.||.:|||:||.|..:||||||:|:.|:|..||:
  Rat   497 LELSYHKRHLDRPVFLRFWETLDRYMVKHKSHLRF 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hyxNP_649863.1 CDC73_N 1..297 CDD:464994 175/300 (58%)
CDC73_C 376..527 CDD:461570 99/162 (61%)
Cdc73NP_001019940.1 CDC73_N 1..297 CDD:464994 175/300 (58%)
Nuclear localization signal. /evidence=ECO:0000250 125..139 8/17 (47%)
Interaction with POLR2A and PAF1. /evidence=ECO:0000250 200..531 197/349 (56%)
Interaction with CTNNB1. /evidence=ECO:0000250 200..250 27/49 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..292 11/31 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 325..358 17/50 (34%)
CDC73_C 357..520 CDD:461570 99/162 (61%)

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