DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neur and EDA18

DIOPT Version :9

Sequence 1:NP_476652.1 Gene:neur / 41085 FlyBaseID:FBgn0002932 Length:754 Species:Drosophila melanogaster
Sequence 2:NP_001324447.1 Gene:EDA18 / 818057 AraportID:AT2G34920 Length:666 Species:Arabidopsis thaliana


Alignment Length:614 Identity:113/614 - (18%)
Similarity:205/614 - (33%) Gaps:181/614 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 VNGAGDVIYGINNEEK--------GVILTGIDTRSL---LWTVIDIYGNCTGIE-FLDSRIYMYQ 266
            :|...|:|..::||:|        .|.:..:.|.:|   .:.|:.......|.: :.|..:::.:
plant   154 LNSVSDIIRRLSNEQKLTASNNGGAVDMPIVKTPTLEKSSFQVVTCSPRIRGRQAYSDLLVHLER 218

  Fly   267 QQPAAIPMATVPAQQQQMPQPAANASSALNSHHPHQQSRRSL---PGHTAAIEHDLERHVMPSLQ 328
            ::...:..........:.||     ...|.|....:..:|.|   ..|....:.||.| ..||..
plant   219 ERHRELESLLGRNAVSRFPQ-----RGRLQSMLRLRSLKRGLAIQDRHRGTTKSDLNR-FQPSST 277

  Fly   329 SLHL-------AGNG--------GSVASVEQAAIAHDLANGLPPLRYNANGRLIPVPFHNTKGRN 378
            .|||       |.|.        |..::||..::.....:|:  |...:..||.|      :.||
plant   278 ILHLREKLREKAANAAAEAGLKKGQQSTVETESMQSKETSGI--LHSPSTERLSP------QKRN 334

  Fly   379 VRLSQDRFVASRTESDFCQGYVFTARPIRIGEKLIVQVLKTEQMYVGALALGLTSCNPAMLQPND 443
            :    :..:..:.|::....|      :::.:.::.:||:.|......    |||..|.  :|..
plant   335 I----EEAILRKNETETKMSY------LQLKKAIVAEVLERESDNTSP----LTSVTPQ--EPRI 383

  Fly   444 LPNDSDFLLDRPEYWVVSKDIAAAPQRGDEIAFFVAPNGEVSISKNNGPAVVVMHVDQSLQLWAF 508
            |.|:.            :..:.:..:...|..|.  ...|:|....                |..
plant   384 LRNEE------------AGKLESGTEGTQETPFL--ETQEMSFQSG----------------WEE 418

  Fly   509 LDVYGSTQSLRMFRQQLPNMVAYPSQPQ--------------VNVNASSSSACNAASTSRMLPMT 559
            .:.|...||  .:.....:.....|:|:              :|..:.....|      |:|...
plant   419 QEEYEDEQS--YYGDMSYDWFTEISRPRTYWEDLRKSRYLEVMNTKSDKDDIC------RLLERR 475

  Fly   560 ESMSSLNAGATAKL---------LHHPSQLSVAQSTSTLASAGG---------VNGSRMISMPSN 606
            .....|.:|...|:         :|...::..|.........|.         ...|..|..|| 
plant   476 TVSGFLQSGLREKIDKLIMSRVQIHPAHRIEEATKEEEKYDIGEEKDEDRDDLSQSSSQIFAPS- 539

  Fly   607 GDILQIQPNGGGTVLVVNLPPASSSHDINGQLAARPTATVTSSGVLAGACSSGTLISTTSSQYIE 671
                                ||.|...::..:.:.||..:.|:.:        .:||...|..::
plant   540 --------------------PAGSWSSLDTGVTSTPTHNLHSTEM--------EIISEMRSHILQ 576

  Fly   672 QPIANSTNNAANKWKDSLSDQQSTDSSAE------------CTICYENPIDSVLYMCGHMCMCYD 724
            ..:..|      :.:||:......::|.:            |.:|.|..::::||.|||||.|..
plant   577 LQLEMS------ELRDSVKTCLDVNASLQKSVHLENPFKRKCCVCNETQVETLLYRCGHMCTCLR 635

  Fly   725 CAIE-QWRGVGGGQCPLCRAVIRDVIRTY 752
            ||.| |:   .||:||:|.|.|.||:|.:
plant   636 CANELQY---NGGKCPICHAKILDVVRVF 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neurNP_476652.1 NEUZ 106..225 CDD:128856 3/10 (30%)
SPRY 108..255 CDD:295394 10/51 (20%)
Neuralized 109..173 CDD:284568
NEUZ 367..489 CDD:128856 19/121 (16%)
SPRY 371..519 CDD:295394 22/147 (15%)
Neuralized 371..436 CDD:284568 10/64 (16%)
zf-C3HC4_3 700..748 CDD:290631 22/60 (37%)
EDA18NP_001324447.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 61 1.000 Domainoid score I3804
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2868
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.