DRSC/TRiP Functional Genomics Resources

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Protein Alignment neur and AT2G27950

DIOPT Version :9

Sequence 1:NP_476652.1 Gene:neur / 41085 FlyBaseID:FBgn0002932 Length:754 Species:Drosophila melanogaster
Sequence 2:NP_001325341.1 Gene:AT2G27950 / 817339 AraportID:AT2G27950 Length:839 Species:Arabidopsis thaliana


Alignment Length:191 Identity:49/191 - (25%)
Similarity:82/191 - (42%) Gaps:43/191 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   590 ASAGGVN----GSRMISMPSNGDILQIQPNGGGTVLVVNLPPASSSHDIN--------------- 635
            |.:||..    .|..:::||  .::.|||.........|.|    :||::               
plant   663 AQSGGQELDAVESPPLTLPS--PVIPIQPRWDHDRSHSNWP----AHDLHQGIGMDWDSINDLRV 721

  Fly   636 --GQLAARPTATVTSSGVLAGACSSGTL-ISTTSSQYIEQPIANSTNNAANKWKDSLSDQQSTD- 696
              |::..|    :.:...:..||....| :..:..|.:...:..||:..... ||:.|.:...: 
plant   722 DMGRIQQR----MDNLQRMLEACMEMQLELQRSIRQEVSAAMHRSTDQPGPS-KDTASYESKWEY 781

  Fly   697 -SSAECTICYENPIDSVLYMCGHMCMCYDCA---IEQWRGVGGGQCPLCRAVIRDVIRTYT 753
             ....|.:|.|:.|||:||.||||..|..||   :|     .||:||:|:|.:.:|:|.|:
plant   782 VRKGICCVCCESNIDSLLYRCGHMNTCEKCAKKLVE-----AGGKCPMCQAPVIEVVRAYS 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neurNP_476652.1 NEUZ 106..225 CDD:128856
SPRY 108..255 CDD:295394
Neuralized 109..173 CDD:284568
NEUZ 367..489 CDD:128856
SPRY 371..519 CDD:295394
Neuralized 371..436 CDD:284568
zf-C3HC4_3 700..748 CDD:290631 22/50 (44%)
AT2G27950NP_001325341.1 mRING-HC-C3HC5_NEU1 787..825 CDD:319561 20/42 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 61 1.000 Domainoid score I3804
eggNOG 1 0.900 - - E1_KOG4172
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2868
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.900

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