DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neur and neurl1b

DIOPT Version :9

Sequence 1:NP_476652.1 Gene:neur / 41085 FlyBaseID:FBgn0002932 Length:754 Species:Drosophila melanogaster
Sequence 2:NP_001313468.1 Gene:neurl1b / 553620 ZFINID:ZDB-GENE-050522-102 Length:579 Species:Danio rerio


Alignment Length:666 Identity:196/666 - (29%)
Similarity:301/666 - (45%) Gaps:140/666 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 GLVRRSPSSCPGPNNLPPLQFH-SVHGDNIRISRDGTLARRFESFCRAITFSARPVRINERICVK 152
            |..||  :|.| |.::...:|| ...|.|||:......|.|..|||..||||.||||:.|::.::
Zfish    50 GAERR--TSAP-PVSIESPRFHPHAKGKNIRLDAHLRRATRKNSFCNGITFSQRPVRLYEKVRLR 111

  Fly   153 FAEISNNWNGGIRFGFTSNDPVTLEGT-LPKYACPDLTNRPGFWAKALHEQYCEKDNILYYYVNG 216
            .:.:...|:|.:|||||:.||..|..| :||||||||..|||:|||||.|:...:||:|.::.:.
Zfish   112 LSGVHTGWSGALRFGFTTLDPGELSLTDIPKYACPDLVTRPGYWAKALPERLAMRDNVLAFWADR 176

  Fly   217 AGDVIYGINNEEKGVILTGIDTRSLLWTVIDIYGNCTGIEFLDSRIYMYQQQPAAIPMATVPAQQ 281
            .|.|.|.||:.|..:...|:.....:|.:|||||....:..|:|   .:.:...|..::|. ...
Zfish   177 HGRVFYSINDGEPILFHCGLSVGCPVWAIIDIYGITQEVTLLES---TFAESVGASCLSTA-RLS 237

  Fly   282 QQMPQPAANASSALNSHHPHQQSRRSLPGHTAAIEHDLERHVMPSLQSLHLAGNGGSVASVEQAA 346
            ..:||  :|..|| |..:...::.::.....|.::......::|...:     :....:||::.|
Zfish   238 AYLPQ--SNHDSA-NYSNNQLETNQAAAAKFATLQLSNYNQLIPCCST-----SSTPSSSVQRPA 294

  Fly   347 IAHDLANGLPPLRYNANGRLIPVPFHNTKGRNVRLSQDRFVASRTESDFCQGYVFTARPIRIGEK 411
            .:..|     ||.       :.:.||..:|.:|.||.||.||.....|..:..:|:.||:|:||.
Zfish   295 RSLSL-----PLD-------VDLHFHPVRGPDVVLSNDRTVACTHFLDSSRTLMFSDRPVRVGET 347

  Fly   412 LIVQVLKTEQMYVGALALGLTSCNPAMLQPNDLPNDSDFLLDRPEYWVVSKDIAAAPQRGDEIAF 476
            |.::|......|.|||..|:|||:|..|...:||.|.:.||||.|||||.:.. ..|..||.::|
Zfish   348 LYLEVGHLGLPYFGALLFGMTSCDPGTLSAGELPADPELLLDRKEYWVVYRGF-PVPTAGDVLSF 411

  Fly   477 FVAPNGEVSISKNNGPAVVVMHVDQSLQLWAFLDVYGSTQSLRMFRQQLPNMVAYPSQPQVNVNA 541
            ....||||....|......::.||.|..||||..::|:...||:    |..:.|.|         
Zfish   412 TFLANGEVHHGVNGVARGRLLCVDSSQVLWAFFTLHGAVNRLRI----LGTVQASP--------- 463

  Fly   542 SSSSACNAASTSRMLPMTESMSSLNAGATAKLLHHPSQLSVAQSTSTLASAGGVNGSRMISMPSN 606
                                               |:..||:|.:|                   
Zfish   464 -----------------------------------PTSPSVSQGSS------------------- 474

  Fly   607 GDILQIQPNGGGTVLVVNLPPASSSHDINGQLAARPTATVTSSGVLAGACSSGTLISTTSSQYIE 671
                   |:...:.|..::..:||:                         |..:|::..||. :.
Zfish   475 -------PDDSDSDLAFSVNRSSSA-------------------------SESSLVTAPSSP-LS 506

  Fly   672 QPIANSTNNAANKWKDSLSDQQSTDSSAECTICYENPIDSVLYMCGHMCMCYDCAIEQWRGVGGG 736
            .|::.|.         |.||...::.|:|||:|::..:|:|:|.|||||:|.||.....|.: ..
Zfish   507 PPVSPSF---------SSSDAPLSNKSSECTVCFDQEVDTVIYTCGHMCLCNDCGQRLKRQI-NA 561

  Fly   737 QCPLCRAVIRDVIRTY 752
            .||:||..|:|||:||
Zfish   562 CCPICRRPIKDVIKTY 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neurNP_476652.1 NEUZ 106..225 CDD:128856 54/120 (45%)
SPRY 108..255 CDD:295394 64/148 (43%)
Neuralized 109..173 CDD:284568 27/64 (42%)
NEUZ 367..489 CDD:128856 49/121 (40%)
SPRY 371..519 CDD:295394 58/147 (39%)
Neuralized 371..436 CDD:284568 27/64 (42%)
zf-C3HC4_3 700..748 CDD:290631 21/47 (45%)
neurl1bNP_001313468.1 SPRY 66..218 CDD:295394 64/151 (42%)
NEUZ 66..185 CDD:128856 54/118 (46%)
Neuralized 67..132 CDD:284568 27/64 (42%)
NEUZ 303..424 CDD:128856 49/121 (40%)
SPRY 306..456 CDD:295394 60/154 (39%)
Neuralized 307..372 CDD:284568 27/64 (42%)
zf-C3HC4_3 526..573 CDD:290631 21/47 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 129 1.000 Domainoid score I5205
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 248 1.000 Inparanoid score I3234
OMA 1 1.010 - - QHG45583
OrthoDB 1 1.010 - - D1384219at2759
OrthoFinder 1 1.000 - - FOG0001576
OrthoInspector 1 1.000 - - otm25323
orthoMCL 1 0.900 - - OOG6_105976
Panther 1 1.100 - - LDO PTHR12429
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1904
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.980

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