DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neur and Neurl4

DIOPT Version :9

Sequence 1:NP_476652.1 Gene:neur / 41085 FlyBaseID:FBgn0002932 Length:754 Species:Drosophila melanogaster
Sequence 2:NP_648688.2 Gene:Neurl4 / 39558 FlyBaseID:FBgn0283503 Length:1780 Species:Drosophila melanogaster


Alignment Length:656 Identity:144/656 - (21%)
Similarity:230/656 - (35%) Gaps:191/656 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 FHSVHGDNIRISRDGTLARR-FESFCRAITFSARPVRINERICVKFAEISNNWNGGIRFGFTSND 172
            ||:..|.:||:..:..:|:| ...|..|:.|||.|:..:....|...:.:..|.|.|..|.|:..
  Fly     9 FHTRCGRSIRLYNNNRMAQRSMRDFSHALVFSAEPLEDDVLFEVVIEKKNTYWGGSIEIGVTAES 73

  Fly   173 PVTLEGTLPKYACPDLTNRPGFW----------AKALHEQY-------CEKDNILYYYVNGAGDV 220
            |..||    ..||. ...|.|.|          .:.|.|.|       .|.|.:.....:| .|:
  Fly    74 PDDLE----LVACA-TAMRNGTWVMSGIDVRKDGRRLFEFYGTDLETLNENDRVGVMRTSG-NDL 132

  Fly   221 IYGINNEEKGVILTGIDTRSLLWTVIDIYGNCTGI-----------EFLDSRIYMYQQQPAAIPM 274
            ::.:|.|.:||....:.  ..||.::|:||.|..:           |.|||.:            
  Fly   133 VFYVNGESQGVAAKNMP--KPLWALVDLYGRCVQVSLCPRDGSGSGELLDSPL------------ 183

  Fly   275 ATVPAQQQQMPQPAANASSALNSHHPHQQSRRSLPGHTAAIEHDLERHVMPSLQSLHLAGNGGSV 339
                  ||.:.|...|...|:|.:              ..::.|           ..:.|| |||
  Fly   184 ------QQPLQQVVQNLDVAMNVN--------------IVVDSD-----------AWMQGN-GSV 216

  Fly   340 ASVEQAAIAHDLANGLPPLRYNANGRLIPVPFHNTKGRNVRLSQDRFVASRTE--SDFCQGYVFT 402
            :                    .|:.||.   ||...|..|:||.:...|.|..  .:|..|.|.|
  Fly   217 S--------------------GADDRLC---FHTRCGSLVKLSPNFRSAERRRPLDEFNNGVVMT 258

  Fly   403 ARPIRIGEKLIVQVLKTEQMYVGALALGLTSCNPAMLQ-PNDLPN--DSDFLLD----------- 453
            .||:|..|...:::.|....:.|::.:|:|:.|||:|. |..:.|  ....::.           
  Fly   259 HRPLRDNELFEIRIDKLVDKWSGSIEVGVTTHNPAVLHFPATMTNMRSGTIMMSGCGILTNGKGT 323

  Fly   454 RPEYWVVSKDIAAAPQRGDEIAFFVAPNGEVSISKNNGPAVVVMHVDQSLQLWAFLDVYGSTQSL 518
            |.:|...:.|   ..:.||.:......||.:. :..||....|........||..:|:||.|..:
  Fly   324 RRQYGEFNLD---ELREGDRVGMMRKANGNLH-NYINGQDQGVAATRAPSTLWGVIDLYGMTIKV 384

  Fly   519 RMFRQQLPNMVAYPSQPQVNVNASSSSACNAASTSRMLPMTESMSSLNAGATAKLLHHPSQ---- 579
                    .:|....:.|.|:            .:|...:...|::.::||.|:...|...    
  Fly   385 --------TIVDRDEREQQNL------------VTRRNNIVAGMTACSSGAGAQHTQHQQHSGTP 429

  Fly   580 -LSVAQSTSTLASAGGVNG-SRMIS----MPSNGDILQIQPNGGGTVLVVNLPPASSSHDINGQL 638
             ||:....|.:.:||...| |..||    :..|.|.|......|....|..          :|:.
  Fly   430 TLSLLSPESEMNAAGAAGGLSETISSTRAIARNDDRLTFHHICGTHATVTQ----------SGRT 484

  Fly   639 AARPTATVT-SSGVL-----------------------AGACSSGTLISTTSSQYIEQPIANSTN 679
            |.||.|... ::||:                       ||:...|  ::|.|:..::.|. ..||
  Fly   485 ALRPNAADDFNNGVVLTRRPLRPNELFQVRLERVVTKWAGSVEMG--VTTHSADELDFPF-TMTN 546

  Fly   680 NAANKW 685
            ..:..|
  Fly   547 VRSGTW 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neurNP_476652.1 NEUZ 106..225 CDD:128856 34/133 (26%)
SPRY 108..255 CDD:295394 44/163 (27%)
Neuralized 109..173 CDD:284568 19/64 (30%)
NEUZ 367..489 CDD:128856 33/137 (24%)
SPRY 371..519 CDD:295394 42/163 (26%)
Neuralized 371..436 CDD:284568 20/66 (30%)
zf-C3HC4_3 700..748 CDD:290631
Neurl4NP_648688.2 NEUZ 5..126 CDD:128856 32/121 (26%)
SPRY_NHR_like 8..168 CDD:293945 44/166 (27%)
NEUZ 221..345 CDD:128856 33/129 (26%)
SPRY_NHR_like 225..387 CDD:293945 42/173 (24%)
NEUZ 464..587 CDD:128856 20/102 (20%)
SPRY_NHR_like 467..629 CDD:293945 18/99 (18%)
NEUZ 653..777 CDD:128856
SPRY_NHR_like 656..818 CDD:293945
SPRY_NHR_like 854..1016 CDD:293945
SPRY_NHR_like 1063..1220 CDD:293945
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457000
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12429
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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