DRSC/TRiP Functional Genomics Resources

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Protein Alignment neur and CG3894

DIOPT Version :10

Sequence 1:NP_476652.1 Gene:neur / 41085 FlyBaseID:FBgn0002932 Length:754 Species:Drosophila melanogaster
Sequence 2:NP_611963.5 Gene:CG3894 / 37959 FlyBaseID:FBgn0035059 Length:322 Species:Drosophila melanogaster


Alignment Length:218 Identity:57/218 - (26%)
Similarity:86/218 - (39%) Gaps:68/218 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 QFHSVHGDNIRISRDGTLARRFESFCRAITFSARPVRINERICVKFAEISNNWNGGIRFGFTSND 172
            :||..||.||::..|.|:|.|..||..|:|||.||:...:...|:..:|...|:|.:|.|.|...
  Fly    64 RFHPYHGSNIQLGDDATVAYRRASFADALTFSERPLAPGDIFLVEIEKIERGWSGHMRLGLTELA 128

  Fly   173 P----VTLEGTLPKYACPDLTNRPGFW----AKALHEQYCEKDNILYYYVNGA------GD---- 219
            |    .:.|| ||.:|.|||.|....|    :|....|..:.::|:....:.|      ||    
  Fly   129 PNVIRTSSEG-LPHFALPDLANLGNSWIYPISKFEMNQRQDANDIIEPETDDAPHRNLLGDATHV 192

  Fly   220 ----------------------------------VIY--GINNEEKG---VILTGID-------- 237
                                              :||  .:.::.||   .|:.|:|        
  Fly   193 RTPRGLLPKRLLRPAMGNGNDSDILLTDKGSRIGIIYVPTVQSDSKGELHFIINGVDRGPVSRDI 257

  Fly   238 --TRSLLWTVIDIYGNCTGIEFL 258
              .|:.|:.|||:||....|..:
  Fly   258 PLNRAPLFVVIDVYGTTKQIRII 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neurNP_476652.1 Neuralized 109..259 CDD:462112 57/217 (26%)
Neuralized 371..520 CDD:462112
mRING-HC-C3HC5_NEU1 698..752 CDD:438309
CG3894NP_611963.5 SPRY_NHR_like 64..280 CDD:293945 57/216 (26%)
SOCS_SOCS_like 283..321 CDD:239687
Blue background indicates that the domain is not in the aligned region.

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