DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neur and Neurl4

DIOPT Version :9

Sequence 1:NP_476652.1 Gene:neur / 41085 FlyBaseID:FBgn0002932 Length:754 Species:Drosophila melanogaster
Sequence 2:XP_006246774.1 Gene:Neurl4 / 303248 RGDID:1308056 Length:1563 Species:Rattus norvegicus


Alignment Length:797 Identity:174/797 - (21%)
Similarity:275/797 - (34%) Gaps:217/797 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 SSCPGPNNLPPL----QFHSVHGDNIRISRDGTLARR---FESFCRAITFSARPVRINERICVKF 153
            ||.||..:...|    :.|...|..:.:|..|..|||   .:.|...:..|..|:|......|:.
  Rat    29 SSGPGLGSSGGLGSGGELHPRTGRLVSLSACGRTARRQQPGQEFNHGLVLSREPLRDGRVFTVRI 93

  Fly   154 AEISNNWNGGIRFGFTSNDPVTLEGTLPKYACPDLTN-RPGFW----------AKALHEQYCEKD 207
            ....|:|:|.|..|.|:.||..|:  .|..|    |. :.|.|          .:::.|:|.:. 
  Rat    94 DRKVNSWSGSIEIGVTALDPSVLD--FPSSA----TGLKGGSWVVSGCSVLRDGRSVLEEYGQD- 151

  Fly   208 NILYYYVNG---------AGDVIYGINNEEKGVILTGIDTRSLLWTVIDIYGNCTGIEFLDSRIY 263
              |...|.|         .|::...:|..:.||..||:..|  :|.|:|:||.||.|..|     
  Rat   152 --LDQLVEGDRVGVERTATGELRLWVNGRDCGVAATGLPAR--VWAVVDLYGKCTQITVL----- 207

  Fly   264 MYQQQPA---AIPMATVPAQQQQMPQPAANASSALNSHHPHQ----QSR-----RSLPGHTAAIE 316
              ..:|.   :.|::|.|.:....|:.:|.:....:......    |:|     .||..|.....
  Rat   208 --PPEPGFSPSTPISTPPLEPLAPPEDSALSEQGTSVDEAFMVSPAQARPETFPNSLDSHNDFAS 270

  Fly   317 HDLERHVMPSLQSLHLAGNGGSV-ASVEQAAIAHDLA---NGLPPLRYNANGRLIPVPFHNTKGR 377
            .:|...|..::.|   |.|||.: .|:.....|..||   :...|: ..:|..|:   ||...|.
  Rat   271 MELSEVVSNAILS---AYNGGLLNVSLSSPPAADGLASSGSATSPI-LTSNDALL---FHEKCGT 328

  Fly   378 NVRLSQDRFVASRTE--SDFCQGYVFTARPIRIGEKLIVQVLKTEQMYVGALALGLTSCNPAMLQ 440
            .::||.:...|.|..  .:|..|.|.|.||:|..|...:::.|....:.|::.:|:|:.||..|:
  Rat   329 LIKLSNNNKTAERRRPLDEFNNGVVMTNRPLRDNEMFEIRIDKLVDKWSGSIEIGVTTHNPNSLE 393

  Fly   441 -PNDLPN-DSDFLL------------DRPEYWVVSKDIAAAPQRGDEIAFFVAPNGEVSISKNNG 491
             |..:.| .|..::            .|.||...|.|   ..|.||.|......|..:....|. 
  Rat   394 YPATMTNLQSGTIMMSGCGILTNGKGTRREYCEFSLD---ELQEGDHIGLTRKSNSALHFFING- 454

  Fly   492 PAVVVMHVDQSLQ-------LWAFLDVYG----------STQSLRM---------------FRQQ 524
                   :||.:.       ::..:|:||          :..|.|:               .|:.
  Rat   455 -------IDQGVATPLTPPVVYGVVDLYGMAVKVTIVHNNNHSDRLRRNNAILRALSPEGALRRA 512

  Fly   525 LPNMVAYPSQPQVNVNASSSSACNAASTSRMLP-----------------------------MTE 560
            .|...|.|.:...:.|....:|......:.:.|                             |.:
  Rat   513 APAASAEPERLLFHPNCGQKAAITHEGRTALRPHATDDFNHGVVLSSRALRDGEVFQVRIDKMVD 577

  Fly   561 SMS-SLNAGATAKLLHHPSQLSVAQSTSTLAS------AGGV--NGSRMI-SMPSNGDILQIQPN 615
            ..: |:..|.|.   |:|:.|.:..:.:.|.|      ..||  ||:.:: ....|.|.|:    
  Rat   578 KWAGSIEIGVTT---HNPAYLQLPSTMTNLRSGTWMMTGNGVMHNGTTILDEYGHNLDRLK---- 635

  Fly   616 GGGTVLVVNLPPASSSHDINGQLAARPTATVTSSGVLA-----GACSSGTLISTTSSQYIEQPIA 675
            .|.||.||.....:....:|| :...|.|.....||.|     |..:..|::.......:.:|:.
  Rat   636 AGDTVGVVRREDGTLHFFVNG-MTQGPAAWNVPPGVYAVVDLYGQAAQATIVDDVEVPPVSEPLP 699

  Fly   676 NSTNNAANKWKDSLSDQQSTDSSAECTICYENPIDSVLYMCGHMCMCYDCAIEQWRG-----VGG 735
            ...|            |.|..|.|...              |..    |....|..|     ..|
  Rat   700 EGNN------------QMSPSSPASAV--------------GGS----DLRFHQLHGSNAVITNG 734

  Fly   736 GQCPL---CRAVIRDVI 749
            |:..|   ||:...|.|
  Rat   735 GRTALRHNCRSEFNDAI 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neurNP_476652.1 NEUZ 106..225 CDD:128856 33/145 (23%)
SPRY 108..255 CDD:295394 45/169 (27%)
Neuralized 109..173 CDD:284568 18/66 (27%)
NEUZ 367..489 CDD:128856 35/137 (26%)
SPRY 371..519 CDD:295394 42/180 (23%)
Neuralized 371..436 CDD:284568 19/66 (29%)
zf-C3HC4_3 700..748 CDD:290631 9/55 (16%)
Neurl4XP_006246774.1 SPRY_NHR_like 45..207 CDD:293945 46/172 (27%)
NEUZ 47..165 CDD:128856 31/126 (25%)
NEUZ 318..439 CDD:128856 34/126 (27%)
SPRY_NHR_like 322..484 CDD:293945 41/172 (24%)
NEUZ 522..644 CDD:128856 23/128 (18%)
SPRY_NHR_like 525..686 CDD:293945 33/168 (20%)
NEUZ 718..840 CDD:128856 10/34 (29%)
SPRY_NHR_like 720..884 CDD:293945 9/32 (28%)
SPRY_NHR_like 917..1085 CDD:293945
NEUZ 917..1043 CDD:128856
NEUZ 1131..1248 CDD:128856
SPRY_NHR_like 1134..1293 CDD:293945
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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