DRSC/TRiP Functional Genomics Resources

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Protein Alignment neur and Neurl1b

DIOPT Version :9

Sequence 1:NP_476652.1 Gene:neur / 41085 FlyBaseID:FBgn0002932 Length:754 Species:Drosophila melanogaster
Sequence 2:NP_001136124.1 Gene:Neurl1b / 303019 RGDID:1564984 Length:546 Species:Rattus norvegicus


Alignment Length:672 Identity:192/672 - (28%)
Similarity:289/672 - (43%) Gaps:154/672 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LVRRSPSSCPGPNNLPPL----QFHS-VHGDNIRISRDGTLARRFESFCRAITFSARPVRINERI 149
            |:...|...|||.....|    :||: ..|.|:|:......|.|..|||..:||:.||:|:.|::
  Rat    18 LLATRPCYGPGPERRAVLGEAPRFHAQAKGKNVRLDGHSRRATRRNSFCNGVTFTQRPIRLYEQV 82

  Fly   150 CVKFAEISNNWNGGIRFGFTSNDPVTLEG-TLPKYACPDLTNRPGFWAKALHEQYCEKDNILYYY 213
            .::...:...|:|.:|||||::||..:.. .:||||||||..|||:|||||.|....:|.:|.|:
  Rat    83 RLRLVAVRPGWSGALRFGFTAHDPSLMSAQDIPKYACPDLVTRPGYWAKALPENLALRDTVLAYW 147

  Fly   214 VNGAGDVIYGINNEEKGVILTGIDTRSLLWTVIDIYGNCTGIEFLDSRIYMYQQQPAAIPMATVP 278
            .:..|.|.|.:|:.|..:...|:.....||.:||:||....::.|:|..     .....|:....
  Rat   148 ADRHGRVFYSVNDGEPVLFHCGVAVGGPLWALIDVYGITDEVQLLESTF-----ADTLTPLRLGQ 207

  Fly   279 AQQQQMPQPAANASSALNSHHPHQQSRRSLPGHTAAIEHDLERH-VMPSLQSLHLAGNGGSVASV 342
            |:....|.|.::.::..::                   ::||.: |:..|..|.|.....:|..|
  Rat   208 ARLSACPPPGSHDAANFDN-------------------NELENNQVVAKLGHLALGRPDAAVPCV 253

  Fly   343 --EQAAIAHDLANGLPPLRYNANGRLIPVPFHNTKGRNVRLSQDRFVASRTESDFCQGYVFTARP 405
              |:|..|..      |...:|..|     ||.|:|.:|.||.||.:|.....|..:..||:.||
  Rat   254 ARERARPASS------PALLDAELR-----FHATRGPDVSLSADRRLACAPRPDGGRTLVFSERP 307

  Fly   406 IRIGEKLIVQVLKTEQMYVGALALGLTSCNPAMLQPNDLPNDSDFLLDRPEYWVVSKDIAAAPQR 470
            :|.||.|.|:|.:.......|:|.|:|||:|..|:|::||.|...||||.|||||:: ....|..
  Rat   308 LRPGESLCVEVGRPGLAAPAAVAFGITSCDPGALRPSELPADPAALLDRKEYWVVAR-AGPVPSG 371

  Fly   471 GDEIAFFVAPNGEVSISKNNGPAVVVMHVDQSLQLWAFLDVYGSTQSLRMFRQQLPNMVAYPSQP 535
            ||.::|.:.|.|:|.::.|..|...::.||.|..||||..|.|....      ||..:....|.|
  Rat   372 GDALSFTLRPGGDVLLAVNGRPRGRLLCVDTSQALWAFFAVRGGVAG------QLRLLGTVQSGP 430

  Fly   536 QVNVNASSSSACNAASTSRMLPMTESMSSLNAGATAKLLHHPSQLSVAQSTSTLASAGGVNGSRM 600
            :....:.|.|.....|.|.|                       ...|.||:|       .:.|.:
  Rat   431 EATTPSGSFSGSQDDSDSDM-----------------------TFGVNQSSS-------ASESSL 465

  Fly   601 ISMPSNGDILQIQPNGGGTVLVVNLPPASSSHDINGQLAARPTATVTSSGVLAGACSSGTLISTT 665
            ::.||:       |..         ||.|.:..     |..|                       
  Rat   466 VTAPSS-------PLS---------PPVSPAFS-----APEP----------------------- 486

  Fly   666 SSQYIEQPIANSTNNAANKWKDSLSDQQSTDSSAECTICYENPIDSVLYMCGHMCMCYDCAIEQW 730
                     |.|.|                   .|||:|:::.:|:|:|.|||||:|:.|.: :.
  Rat   487 ---------AGSRN-------------------GECTVCFDSEVDTVIYTCGHMCLCHSCGL-RL 522

  Fly   731 RGVGGGQCPLCRAVIRDVIRTY 752
            |......||:||..|:|||:.|
  Rat   523 RRQARACCPICRRPIKDVIKIY 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neurNP_476652.1 NEUZ 106..225 CDD:128856 49/124 (40%)
SPRY 108..255 CDD:295394 57/148 (39%)
Neuralized 109..173 CDD:284568 23/64 (36%)
NEUZ 367..489 CDD:128856 49/121 (40%)
SPRY 371..519 CDD:295394 60/147 (41%)
Neuralized 371..436 CDD:284568 27/64 (42%)
zf-C3HC4_3 700..748 CDD:290631 20/47 (43%)
Neurl1bNP_001136124.1 SPRY 40..189 CDD:295394 57/148 (39%)
NEUZ 40..159 CDD:128856 48/118 (41%)
Neuralized 41..106 CDD:284568 23/64 (36%)
NEUZ 271..390 CDD:128856 50/124 (40%)
Neuralized 273..338 CDD:284568 27/64 (42%)
zf-C3HC4_3 490..540 CDD:290631 21/69 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 127 1.000 Domainoid score I5248
eggNOG 1 0.900 - - E1_KOG4172
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H35443
Inparanoid 1 1.050 227 1.000 Inparanoid score I3394
OMA 1 1.010 - - QHG45583
OrthoDB 1 1.010 - - D1384219at2759
OrthoFinder 1 1.000 - - FOG0001576
OrthoInspector 1 1.000 - - otm45305
orthoMCL 1 0.900 - - OOG6_105976
Panther 1 1.100 - - LDO PTHR12429
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1904
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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