DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neur and neurl4

DIOPT Version :9

Sequence 1:NP_476652.1 Gene:neur / 41085 FlyBaseID:FBgn0002932 Length:754 Species:Drosophila melanogaster
Sequence 2:NP_001090721.1 Gene:neurl4 / 100036703 XenbaseID:XB-GENE-5825550 Length:1477 Species:Xenopus tropicalis


Alignment Length:742 Identity:161/742 - (21%)
Similarity:263/742 - (35%) Gaps:226/742 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 QFHSVHGDNIRISRDGTLARR---FESFCRAITFSARPVRINERICVKFAEISNNWNGGIRFGFT 169
            :.|...|..|.:|.....|.|   .:.|.:.:..||||:...|...|:.....|:|:|.:..|.|
 Frog     3 ELHPRTGKLISLSNGNRTAARKQPAQEFNQGLVVSARPLGPGEVFTVRLDRKMNSWSGSMEIGLT 67

  Fly   170 SNDPVTLEGTLPKYACPDLTN-RPGFW----------AKALHEQYCEKDNILYYYVNGAGDVI-- 221
            :.||..|:  .|..|    |. :.|.|          .:::.|:|.:..:.|     |.||.:  
 Frog    68 TQDPAFLD--FPSSA----TGLKGGSWIVSGCSVLEDGRSVLEEYGQDLDQL-----GEGDRVGV 121

  Fly   222 ---------YGINNEEKGVILTGIDTRSLLWTVIDIYGNCTGIEFLDSRIYMYQQQPAAIPMATV 277
                     ..:|..:.|....||..|  :|.|:|:||.||.|..|..:                
 Frog   122 QRSISGELHLWVNGRDCGAASCGIPPR--VWAVVDLYGKCTQITVLSCQ---------------- 168

  Fly   278 PAQQQQMPQPAANASSALNSHHPHQQSR-----RSLPGHTAAIEHDLERHVMPSLQSLHLAGNGG 337
            |..:::..:.|.....:|   .|..|||     .||...:.....:|...|..::    |:...|
 Frog   169 PPPEEEEEEDAEEQEGSL---VPLGQSRPDKFPNSLDTDSGFPSTELSAVVSNAI----LSAYHG 226

  Fly   338 SVASVE----QAAIAHDLANGLPPLRYNANGRLIPVPFHNTKGRNVRLSQDRFVASRTE--SDFC 396
            |:.||.    .|||.|.     ||   ..|..|:   ||...|..::||.....|.|..  .:|.
 Frog   227 SLLSVSLGSPPAAIEHS-----PP---TCNDALL---FHEKCGTLIKLSNGNKTAERRRPLDEFN 280

  Fly   397 QGYVFTARPIRIGEKLIVQVLKTEQMYVGALALGLTSCNPAMLQ-PNDLPN--DSDFLLD----- 453
            .|.|.|.||:|..|...:::.|....:.|::.:|:|:.||..|: |..:.|  ....::.     
 Frog   281 NGVVMTNRPLRDCEMFEIRIDKLVDKWSGSIEIGVTTHNPNSLEYPATMTNLRSGTIMMSGCGIL 345

  Fly   454 ------RPEYWVVSKDIAAAPQRGDEIA----------FFVAPNG-EVSISKNNGPAVVVMHVDQ 501
                  |.||...|.|   ..|.||.|.          |::  || :..::....|.||      
 Frog   346 TNGKGTRREYCEFSLD---ELQEGDHIGLTRKSSGALHFYI--NGMDQGVASCQTPPVV------ 399

  Fly   502 SLQLWAFLDVYGSTQSLRMF-------RQQLPNMVAYPSQPQVNVNASS---------------- 543
                :..:|:||....:.:.       |.:..|.:.....|....::||                
 Frog   400 ----YGVVDLYGMAVKVTIVHNHNHADRLRRNNAILRARSPDTGRHSSSTPEPGQLLFHSNCGQK 460

  Fly   544 SSACNAASTSRMLPMTESMS-----------------------------SLNAGATAKLLHHPSQ 579
            :|..|...|:.....|:..:                             |:..|.|.   |:|:.
 Frog   461 ASIINGGRTALRPHATDDFNHGVVLSNRPLQNNEVFQVRIDKMVDKWAGSIEIGVTT---HNPAY 522

  Fly   580 LSVAQSTSTLAS------AGGV--NGSRMISMPSN-------GDILQIQPNGGGT---------- 619
            |.:..:.:.|.|      ..||  ||:.::....:       ||.:.:.....||          
 Frog   523 LQLPSTMTNLRSGTWMMTGNGVMHNGTTILDEYGHNLDRLKAGDTVGVVRREDGTLNFFVNGIAQ 587

  Fly   620 -VLVVNLPP-ASSSHDINGQLAARPTATVTSSGV-LAG------ACSSGT---LISTTSSQYIEQ 672
             |...|:|| ..:..|:.|| ||:.|....|..: |.|      |.:.||   |:|.:..::...
 Frog   588 GVAAWNVPPNVFAVVDLYGQ-AAQATIMDESDALPLPGDEDEGLALTPGTPCALLSLSDLRFHHL 651

  Fly   673 PIANS--TN--------NAANKWKDSL 689
            ..||:  ||        |:.:::.|::
 Frog   652 HGANALITNGGRTVLRKNSRSEFNDAI 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neurNP_476652.1 NEUZ 106..225 CDD:128856 32/141 (23%)
SPRY 108..255 CDD:295394 44/171 (26%)
Neuralized 109..173 CDD:284568 18/66 (27%)
NEUZ 367..489 CDD:128856 36/148 (24%)
SPRY 371..519 CDD:295394 42/174 (24%)
Neuralized 371..436 CDD:284568 19/66 (29%)
zf-C3HC4_3 700..748 CDD:290631
neurl4NP_001090721.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26 6/22 (27%)
SPRY_NHR_like 3..165 CDD:293945 45/174 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..196 7/46 (15%)
SPRY_NHR_like 253..415 CDD:293945 42/176 (24%)
SPRY_NHR_like 453..613 CDD:293945 29/163 (18%)
SPRY_NHR_like 647..811 CDD:293945 6/32 (19%)
SPRY_NHR_like 843..1008 CDD:293945
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1012..1041
SPRY_NHR_like 1050..1209 CDD:293945
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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