DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment neur and neurl1

DIOPT Version :10

Sequence 1:NP_476652.1 Gene:neur / 41085 FlyBaseID:FBgn0002932 Length:754 Species:Drosophila melanogaster
Sequence 2:NP_001090706.1 Gene:neurl1 / 100036686 XenbaseID:XB-GENE-954449 Length:555 Species:Xenopus tropicalis


Alignment Length:668 Identity:184/668 - (27%)
Similarity:289/668 - (43%) Gaps:177/668 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 LPPLQFH-SVHGDNIRISRDGTLARRFESFCRAITFSARPVRINERICVKFAEISNNWNGGIRFG 167
            :.||.|| ...|..|.:.......:|..|||.|||||.|||.|:|::.:|..:....|:|.:|.|
 Frog    43 ITPLLFHPHAKGSQIIMDTSQKAVKRQASFCNAITFSNRPVVIHEQVRLKITKKQCCWSGALRLG 107

  Fly   168 FTSNDPVTLE-GTLPKYACPDLTNRPGFWAKALHEQYCEKDNILYYYVNGAGDVIYGINNEEKGV 231
            |||.||..:. .||||||||||.::.|||||||.|::..:.||:.::|:..|.|.|.:|:....:
 Frog   108 FTSKDPSRINPDTLPKYACPDLVSQSGFWAKALPEEFANEGNIIAFWVDKKGRVFYRVNDFGSML 172

  Fly   232 ILTGIDTRSLLWTVIDIYGNCTGIEFLDSRIYMYQQQPAAIPMATVPAQQQQMPQPAANASSA-- 294
            ..:|:.....||.:||:||...|:|.|||.|..        |..:.|.....:|:|:....:.  
 Frog   173 FFSGVRITEPLWALIDVYGLTRGVELLDSEIIP--------PDCSRPRSFTSIPRPSLRRETEDT 229

  Fly   295 --------LNSHHPHQQSRRS---LPGHTAAIEHDLERHVMPS-LQSLHLAGNGGSVASVEQAAI 347
                    ||....:.|:..:   :|.::...:|.   |::|| |:|                  
 Frog   230 RLSVSLCDLNLQEDNYQTMTTMCPIPQNSLNSQHS---HLLPSQLES------------------ 273

  Fly   348 AHDLANGLPPLRYNANGRLIPVPFHNTKGRNVRLSQDRFVASRTESDFCQGYVFTARPIRIGEKL 412
              ||.                  ||..:|.:::...|:.||....:...:..|||.||:||.|.:
 Frog   274 --DLR------------------FHQLRGAHIKTLDDQTVARLEHAREERTLVFTNRPLRINETI 318

  Fly   413 IVQVLKTEQMYVGALALGLTSCNPAMLQPNDLPNDSDFLLDRPEYWVVSKDIAAAPQRGDEIAFF 477
            .|::.|:.....|.|:.|:|||:|:.|:|:|||.:.:.|:||.|:|.|.: :....|.||.:.|.
 Frog   319 FVKINKSNSSRSGTLSYGVTSCDPSTLRPSDLPYNPESLVDRKEFWAVCR-VLVPLQSGDILGFV 382

  Fly   478 VAPNGEVSISKNNGPAVVVMHVDQSLQLWAFLDVYGSTQSLRMFRQQLP---NMVAYPSQPQVNV 539
            :...||:.:|.|.....:.:.||.|..||.|..::|:...:|:....:.   ...:.||.|....
 Frog   383 INGEGELHLSHNGTSTGMQVCVDCSQPLWMFFGLHGTIMQIRILGSTISTDNREASAPSSPTSAP 447

  Fly   540 NASSSSACNAASTSRMLPMTESMSSLNAGATAKLLHHPSQLSVAQSTSTLASAGGVNGSRMISMP 604
            | |.::.|:|.|.    |:..|..|...|         |.:::....|.            :|||
 Frog   448 N-SPTAPCSAISD----PILNSCVSAPMG---------SSINITAPNSP------------VSMP 486

  Fly   605 SNGDILQIQPNGGGTVLVVNLPPASSSHDINGQLAARPTATVTSSGVLAGACSSGTLISTTSSQY 669
                                                                             
 Frog   487 ----------------------------------------------------------------- 486

  Fly   670 IEQPIANSTNNAANKWKDSLSDQQSTDSSAECTICYENPIDSVLYMCGHMCMCYDCAIEQWRGVG 734
             |.|::.|.:.:   |.|            ||||||||.:|:|:|.|||||:||.|.: :.:.:.
 Frog   487 -ESPLSPSLSGS---WSD------------ECTICYENLVDTVIYSCGHMCLCYTCGL-KLKKMN 534

  Fly   735 GGQCPLCRAVIRDVIRTY 752
            ...||:||.:|:|:|:||
 Frog   535 NACCPICRRLIKDIIKTY 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neurNP_476652.1 Neuralized 109..259 CDD:462112 62/151 (41%)
Neuralized 371..520 CDD:462112 49/148 (33%)
mRING-HC-C3HC5_NEU1 698..752 CDD:438309 26/53 (49%)
neurl1NP_001090706.1 NEUZ 44..166 CDD:128856 54/121 (45%)
Neuralized 277..427 CDD:462112 50/150 (33%)
RING_Ubox 498..554 CDD:473075 30/68 (44%)

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