DRSC/TRiP Functional Genomics Resources

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Protein Alignment tgo and CBF1

DIOPT Version :10

Sequence 1:NP_731308.1 Gene:tgo / 41084 FlyBaseID:FBgn0264075 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_012594.1 Gene:CBF1 / 853523 SGDID:S000003821 Length:351 Species:Saccharomyces cerevisiae


Alignment Length:165 Identity:32/165 - (19%)
Similarity:58/165 - (35%) Gaps:57/165 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DKERFASRENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMKALRGTGNT 72
            |:.:...:::|.|:|||||..:...|..|||::|     .|:..|..||..|..:::.|:.|...
Yeast   217 DEWKKQRKDSHKEVERRRRENINTAINVLSDLLP-----VRESSKAAILACAAEYIQKLKETDEA 276

  Fly    73 SSDGTYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNYTQSDWYGTSLYEHI 137
            :.:.......|::|....|                                              
Yeast   277 NIEKWTLQKLLSEQNASQL---------------------------------------------- 295

  Fly   138 HPDDREKIREQLSTQESQNAGRILDLKSGTVKKEG 172
             ....||::|:|.     ||.:.::.....::|||
Yeast   296 -ASANEKLQEELG-----NAYKEIEYMKRVLRKEG 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tgoNP_731308.1 bHLH-PAS_ARNT 9..74 CDD:381517 19/64 (30%)
PAS 90..154 CDD:214512 5/63 (8%)
PAS_11 282..384 CDD:464214
CBF1NP_012594.1 bHLHzip_scCBP1 217..303 CDD:381404 25/137 (18%)
Blue background indicates that the domain is not in the aligned region.

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