DRSC/TRiP Functional Genomics Resources

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Protein Alignment tgo and AT3G56770

DIOPT Version :10

Sequence 1:NP_731308.1 Gene:tgo / 41084 FlyBaseID:FBgn0264075 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_191236.1 Gene:AT3G56770 / 824844 AraportID:AT3G56770 Length:230 Species:Arabidopsis thaliana


Alignment Length:239 Identity:50/239 - (20%)
Similarity:90/239 - (37%) Gaps:76/239 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ANIQDKERFASRENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMKALRG 68
            |.:.:.:..||..||.|.||:||.::.:::.:|..:: :|::   |.||.|:|...|..:|    
plant    35 ATVYEDKALASLRNHKEAERKRRARINSHLNKLRKLL-SCNS---KTDKSTLLAKVVQRVK---- 91

  Fly    69 TGNTSSDGTYKPSFLTDQELKHLILEAAD----------GFLFVVSCDSG---RVIYVSDSVTPV 120
                              |||...||..|          ..|.:..|..|   |:|:       .
plant    92 ------------------ELKQQTLEITDETIPSETDEISVLNIEDCSRGDDRRIIF-------K 131

  Fly   121 LNYTQSDWYGTSLYEHIHPDDREKIREQLSTQESQN--------AGRILDLKSGTVKKEGH-QSS 176
            :::...|          .|:..:.:.|.|.:.:.:.        .||..::......||.| ..|
plant   132 VSFCCED----------RPELLKDLMETLKSLQMETLFADMTTVGGRTRNVLVVAADKEHHGVQS 186

  Fly   177 MRLSMGARRGFICRMRVGNVNPESMVSGH-----LNRLKQRNSL 215
            :.....|.:..:.|      :.:|::.||     ..|||:|.:|
plant   187 VNFLQNALKSLLER------SSKSVMVGHGGGGGEERLKRRRAL 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tgoNP_731308.1 bHLH-PAS_ARNT 9..74 CDD:381517 18/64 (28%)
PAS 90..154 CDD:214512 12/76 (16%)
PAS_11 282..384 CDD:464214
AT3G56770NP_191236.1 bHLH_AtAIG1_like 39..118 CDD:381461 25/104 (24%)
ACT_UUR-ACR-like 132..198 CDD:153145 11/75 (15%)
Blue background indicates that the domain is not in the aligned region.

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