DRSC/TRiP Functional Genomics Resources

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Protein Alignment tgo and Met

DIOPT Version :9

Sequence 1:NP_001262397.1 Gene:tgo / 41084 FlyBaseID:FBgn0264075 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_001285132.1 Gene:Met / 32114 FlyBaseID:FBgn0002723 Length:716 Species:Drosophila melanogaster


Alignment Length:753 Identity:161/753 - (21%)
Similarity:267/753 - (35%) Gaps:234/753 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DEANIQDKERFASRENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMK-- 64
            |.||.::....|        |::||:|:.|.|.||:.|||..:..:|:.||..:||.|...::  
  Fly    33 DPANGREARNLA--------EKQRRDKLNASIQELATMVPHAAESSRRLDKTAVLRFATHGLRLQ 89

  Fly    65 --------------ALRGTGNTSSDGTYKPS---FLTDQELKHLILEAADGFLFVVSCDSGRVIY 112
                          .|:|||.::|.....|:   .|||     .:::..|.....::| ||:::.
  Fly    90 YVFGKSASRRRKKTGLKGTGMSASPVGDLPNPSLHLTD-----TLMQLLDCCFLTLTC-SGQIVL 148

  Fly   113 VSDSVTPVLNYTQSDWYGTSLYEHIHPDDREKIREQL---------------------------S 150
            ||.||..:|.:.|||.||.:|.:..||||::.:|:||                           |
  Fly   149 VSTSVEQLLGHCQSDLYGQNLLQITHPDDQDLLRQQLIPRDIETLFYQHQHHQQQGHNPQQHSTS 213

  Fly   151 TQESQNAGRILDLKSGTVKKEGHQSSM-------------------------------RLSMGAR 184
            |..|.:..   ||:...::.|.|:...                               ||.|. |
  Fly   214 TSASTSGS---DLEEEEMETEEHRLGRQQGEADDDEDHPYNRRTPSPRRMAHLATIDDRLRMD-R 274

  Fly   185 RGFICRMRVGNVNPES-----------------------------MVSGHLNRLKQRNSLG---- 216
            |.|..|:...:...|:                             :||..:.|.:..|.|.    
  Fly   275 RCFTVRLARASTRAEATRHYERVKIDGCFRRSDSSLTGGAAANYPIVSQLIRRSRNNNMLAAAAA 339

  Fly   217 ---------PSRDGTNYAVVHCTGYIKNWPPTDMFPNMHMERDVDDMSSHCCLVAIGRLQVTSTA 272
                     |..|....|.:|  |...|              |:       .|||:.|:......
  Fly   340 VAAEAATVPPQHDAIAQAALH--GISGN--------------DI-------VLVAMARVLREERP 381

  Fly   273 ANDMSGSNN----------QSEFITRHAMDGKFTFVDQRVLNILGYTPTELLGKICYDFFHPEDQ 327
            ..:..|:..          |.|:.|||.:||.....|||:..:.||...|:.....:.|.|.:|.
  Fly   382 PEETEGTVGLTIYRQPEPYQLEYHTRHLIDGSIIDCDQRIGLVAGYMKDEVRNLSPFCFMHLDDV 446

  Fly   328 SHMKESFDQVLKQKGQMFSLLYRARAKNSEYVWLRTQAYAFLNPYTDEVEYIVCTNSSGKTMHGA 392
            ..:..:..|:...........||..::|..:::|.|:.:..::..:::|...:|.|:.       
  Fly   447 RWVIVALRQMYDCNSDYGESCYRLLSRNGRFIYLHTKGFLEVDRGSNKVHSFLCVNTL------- 504

  Fly   393 PLDAAAAHTPEQVQQQQQQEQHVYVQAAPGVDYARRELTPVGSATNDGMYQTHMLAMQAPTPQQQ 457
             ||..|..  ::||:.:::...:          .:.|: |..|::.|      :.|.|||...::
  Fly   505 -LDEEAGR--QKVQEMKEKFSTI----------IKAEM-PTQSSSPD------LPASQAPQQLER 549

  Fly   458 ------QQQQQRPGSAQTT---------PVGYTYDTTHSPYSAGGPSP---LAKIP------KSG 498
                  :..|:...||:|.         ..||:............|||   ||.:|      ||.
  Fly   550 IVLYLIENLQKSVDSAETVGGQGMESLMDDGYSSPANTLTLEELAPSPTPALALVPPAPSSVKSS 614

  Fly   499 TSPTPVAPNSWAALRPQQQQQQQQPVTEGYQYQQTSPARSPSGPTYTQLSAGNGNRQQAQPGAYQ 563
            .|.:....|..||.:.||:.|:|:   |..:.|......|..| ...|||:   ...:|:..:..
  Fly   615 ISKSVSVVNVTAARKFQQEHQKQR---ERDREQLKERTNSTQG-VIRQLSS---CLSEAETASCI 672

  Fly   564 AGPPPPPNAPGMWDWQQAGGHPHPPHPTAHPHHPHAHP 601
            ..|....:|      .:|...|.|...|:.|...|..|
  Fly   673 LSPASSLSA------SEAPDTPDPHSNTSPPPSLHTRP 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tgoNP_001262397.1 HLH 15..67 CDD:278439 17/67 (25%)
PAS 87..192 CDD:279347 36/162 (22%)
PAS 90..154 CDD:214512 24/90 (27%)
PAS_11 283..384 CDD:291273 23/100 (23%)
PAS 283..380 CDD:238075 22/96 (23%)
MetNP_001285132.1 HLH 38..87 CDD:238036 18/56 (32%)
PAS 137..>186 CDD:238075 20/49 (41%)
PAS_11 403..510 CDD:291273 26/114 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444968
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3561
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23042
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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