DRSC/TRiP Functional Genomics Resources

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Protein Alignment tgo and ahr2

DIOPT Version :10

Sequence 1:NP_731308.1 Gene:tgo / 41084 FlyBaseID:FBgn0264075 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_571339.1 Gene:ahr2 / 30517 ZFINID:ZDB-GENE-990714-16 Length:1027 Species:Danio rerio


Alignment Length:560 Identity:121/560 - (21%)
Similarity:209/560 - (37%) Gaps:155/560 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMK-------ALRGTGN----TSSDG 76
            :|.|:::.:.:.:|::::|....:..:.|||::||::|.::|       .::.||.    ....|
Zfish    35 KRHRDRLNSELDKLTNLLPFSEDVRARLDKLSVLRLSVGYLKVKSFFNATIKKTGGNGWLNDRSG 99

  Fly    77 TYKPSFLTDQELK-------HLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNYTQSDWYGTSLY 134
            |:..:..|...|.       .|:|:|.:||:.||:.: |.|.|.|.::...|.:.|||....|::
Zfish   100 TFGGNGQTASSLDGVNFSEGELLLQALNGFVLVVTAE-GYVFYSSPTIQDYLGFHQSDVVHHSVF 163

  Fly   135 EHIHPDDREKIREQL-----STQESQNAGRILDLKSGTVKKEGHQSSMRL----SMGARRGFICR 190
            |.||.|||...|.||     .:.:|.:....:...|...:...:.:...:    |....|.|.||
Zfish   164 ELIHTDDRAMFRRQLHFALNPSSDSADGSEAMQSSSDITRDMVNYNPQHIPPENSSFLERSFCCR 228

  Fly   191 MRVGNVNPESMVS----GHLNRLKQRNSLGPSRDGTNYAVVHCTGYIKNWPPTDMFPNMHMERDV 251
            .|....|....::    |.|..|..:|.|  :.|||   :.|        |...:|         
Zfish   229 FRCLLDNSSGFLALNFQGRLKYLHGQNKL--AEDGT---LAH--------PQLALF--------- 271

  Fly   252 DDMSSHCCLVAIGRLQVTSTAANDMSGSNNQSE---FITRHAMDGKFTFVDQRVLNILGYTPTEL 313
                            :.:|.....|....:|:   |.|:|.:|.....:|.|...:||||..||
Zfish   272 ----------------IIATPLQPPSILEIRSKTLLFQTKHKLDFTPMGIDTRGKVVLGYTEIEL 320

  Fly   314 LGKIC-----YDFFHPEDQSHMKESFDQVLKQKGQMFSLLYRARAKNSEYVWLRTQAYAFLNPYT 373
                |     |.|.|..|..:..::..:::| .|:....::|..:|...::|:  ||.|.|....
Zfish   321 ----CMRGSGYQFIHAADMMYCADNHIRMIK-TGESGLTVFRLLSKGGTWIWV--QANARLVYKA 378

  Fly   374 DEVEYIVC-----TNSSGKTMHGAPLDAAAAHTPEQVQQQQQQEQHVYVQAAPGVDYARRELTPV 433
            ...::|:.     ||..|:               |.::|::.|                   .|.
Zfish   379 GRPDFIIARQRALTNEEGE---------------EHLRQRKLQ-------------------LPF 409

  Fly   434 GSATNDG-MYQTHMLAMQAPTPQQQQQQQQRPGSAQTTP--------VGYTYDTTHSPYSA---- 485
            ..||.:| :|:.      .||....:.|.|..|.....|        :|......||.||.    
Zfish   410 NCATGEGVLYEV------GPTLDVAEIQNQSKGQKMLNPPSLDPDSLLGSMLKQDHSLYSQNNDP 468

  Fly   486 ----------GGPSPLAKIPKSGTSPTPVAPNSWAALRPQ 515
                      |....|..:|  |.:..|..||:...::.:
Zfish   469 NSQFTIDKAFGDSHALLNVP--GNTWQPSTPNTVPGIKEE 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tgoNP_731308.1 bHLH-PAS_ARNT 9..74 CDD:381517 13/61 (21%)
PAS 90..154 CDD:214512 25/68 (37%)
PAS_11 282..384 CDD:464214 29/114 (25%)
ahr2NP_571339.1 bHLH-PAS_AhR_like 27..85 CDD:381539 11/49 (22%)
PAS 120..183 CDD:214512 25/63 (40%)
PAS_3 312..386 CDD:430001 21/80 (26%)
Med15 <600..>832 CDD:312941
Blue background indicates that the domain is not in the aligned region.

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