DRSC/TRiP Functional Genomics Resources

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Protein Alignment tgo and Arnt2

DIOPT Version :9

Sequence 1:NP_001262397.1 Gene:tgo / 41084 FlyBaseID:FBgn0264075 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_031514.3 Gene:Arnt2 / 11864 MGIID:107188 Length:712 Species:Mus musculus


Alignment Length:705 Identity:312/705 - (44%)
Similarity:398/705 - (56%) Gaps:112/705 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DEANIQDKERFASRENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMKAL 66
            |:.:.:...:| |||||.|||||||||||.|||||||||||||||||||||||||||||:|||::
Mouse    53 DDEDGEGPSKF-SRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSM 116

  Fly    67 RGTGNTSSDGTYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNYTQSDWYGT 131
            |||||.|:||.|||||||:||||||||||||||||||:.::|||||||||||||||..||:|:|:
Mouse   117 RGTGNKSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFGS 181

  Fly   132 SLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRGFICRMRVGNV 196
            :|||.:||||.||:||||.|.|:...|||||||:|||||||.|||||:.||:||.||||||.||.
Mouse   182 TLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMRCGNA 246

  Fly   197 NPESMVSGHLNRLKQ--RNSLGPSRDG-TNYAVVHCTGYIKNWPPTDM-FPNMHMERDVD-DMSS 256
            ..:.:....:..:::  ||.|||.::| ..|||||||||||.|||..| .|    |.|.| ...|
Mouse   247 PLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGYIKAWPPAGMTIP----EEDADVGQGS 307

  Fly   257 HCCLVAIGRLQVTST-AANDMSGSNNQSEFITRHAMDGKFTFVDQRVLNILGYTPTELLGKICYD 320
            ..||||||||||||: ...||||.:..:||::||..||..||||.|.::::||.|.:||||...:
Mouse   308 KYCLVAIGRLQVTSSPVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILE 372

  Fly   321 FFHPEDQSHMKESFDQVLKQKGQMFSLLYRARAKNSEYVWLRTQAYAFLNPYTDEVEYIVCTNSS 385
            |.|||||||::|||.||:|.|||:.|::||.|.||.|::.:||.::.|.|||:||:||::|||::
Mouse   373 FCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTKNREWLLIRTSSFTFQNPYSDEIEYVICTNTN 437

  Fly   386 GKTMHGAPLDAAAAHTPEQVQQQQQQEQHVYVQAAPGVDYARRELTPV----------GSATN-- 438
                               |:|.|||:..:.|....|:........||          |.:..  
Mouse   438 -------------------VKQLQQQQAELEVHQRDGLSSYDLSQVPVPNLPAGVHEAGKSVEKA 483

  Fly   439 DGMYQ-------THMLAMQAPTPQQQQQQQQRPGSAQTTPVGYTYDTTHSPYSAGGPSPLAKIPK 496
            |.::.       ..|.|..:.:.::........||.|.             ||.|.|.|.....|
Mouse   484 DAIFSQERDPRFAEMFAGISASEKKMMSSASASGSQQI-------------YSQGSPFPAGHSGK 535

  Fly   497 SGTSPTPVAPN----SWAALRPQQQQQQQQPVTEGYQYQQTSPARSPSGPTYTQLSA---GNGNR 554
            :.:|.....|.    ..::...|...|..:.:.:|......|....|..|:.||.||   |:.:.
Mouse   536 AFSSSVVHVPGVNDIQSSSSTGQNISQISRQLNQGQVAWTGSRPPFPGQPSKTQSSAFGIGSSHP 600

  Fly   555 QQAQPGAYQ-----AGPPPPPNA--------PGMWDWQQAGGH--------------PHPPHPTA 592
            ..|.|.:|.     |...|..||        ||..:..|:||.              .|....:.
Mouse   601 YPADPSSYSPLSSPAASSPSGNAYPSLANRTPGFAESGQSGGQFQGRPSEVWSQWQSQHHGQQSG 665

  Fly   593 HPHHPHAHPGGPAGAGQPQGQEFSDMLQML-DHTPTT----FEDL-NINMFSTPF 641
            . .|.|..||        |.:.|.|||.|. |.|..|    .||. ::.|| .||
Mouse   666 E-QHSHQQPG--------QTEVFQDMLPMPGDPTQGTGNYNIEDFADLGMF-PPF 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tgoNP_001262397.1 HLH 15..67 CDD:278439 47/51 (92%)
PAS 87..192 CDD:279347 78/104 (75%)
PAS 90..154 CDD:214512 47/63 (75%)
PAS_11 283..384 CDD:291273 54/100 (54%)
PAS 283..380 CDD:238075 52/96 (54%)
Arnt2NP_031514.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..73 9/20 (45%)
bHLH-PAS_ARNT 62..124 CDD:381517 54/62 (87%)
PAS 137..243 CDD:366402 79/105 (75%)
PAS_11 336..436 CDD:373151 54/99 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 573..712 40/148 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834641
Domainoid 1 1.000 165 1.000 Domainoid score I3902
eggNOG 1 0.900 - - E1_KOG3561
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 505 1.000 Inparanoid score I1330
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D168098at33208
OrthoFinder 1 1.000 - - FOG0000695
OrthoInspector 1 1.000 - - otm42502
orthoMCL 1 0.900 - - OOG6_105223
Panther 1 1.100 - - O PTHR23042
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2390
SonicParanoid 1 1.000 - - X1928
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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