DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kcmf1 and CG15286

DIOPT Version :9

Sequence 1:NP_001163560.1 Gene:Kcmf1 / 41082 FlyBaseID:FBgn0037655 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_001285929.1 Gene:CG15286 / 34834 FlyBaseID:FBgn0028531 Length:511 Species:Drosophila melanogaster


Alignment Length:340 Identity:97/340 - (28%)
Similarity:142/340 - (41%) Gaps:75/340 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSRHEGVSCDSCLKSNFNGRRYKCLICYDYDLCADCYEDGVTSTRHLVEHPMQCILTRSDIELYF 65
            |:|||.:.|..|.|.:...|.|:||.|.|:|:|.:||::..|::.|..:||:.|:|..:|:||||
  Fly     3 MNRHERIECKGCGKRSLTFRCYRCLSCQDFDICEECYDNDFTTSTHPFDHPVVCVLIPADVELYF 67

  Fly    66 GGEMLASDQPQSFTCPYCKKMGFSDATLLEHVSAEHTETSLEVVCPVCAGLPGGEPNLVTDDFAG 130
            |||.:::..|||:.|||||:.||:::|.||||||.|.:.|     |:......|   |.....|.
  Fly    68 GGEYISNYPPQSYRCPYCKRWGFNESTFLEHVSAMHPDAS-----PLLVSTMVG---LFEQQQAA 124

  Fly   131 HLTLEHRQ----------------GPRELISFLDEPSAIRHGGGVRRIPGRTLGGPRTRRSNMHF 179
            .|.||:.|                .|...::...||  :...|..||:..|. ...|:||     
  Fly   125 RLFLENEQLASIAVAATSRNELMRRPEGSMALYLEP--LNRDGSYRRVVERN-NEDRSRR----- 181

  Fly   180 SSSSGLSALSPSGRESVDPIAELLSQLSGVRRGGPPTSQLQQLQMQMQLDRQQVTASRQIDRLPR 244
                    |||.||                                   ||.|.....:..|:.|
  Fly   182 --------LSPDGR-----------------------------------DRLQALVRERYSRIAR 203

  Fly   245 RAHPIVSTSNSNAAMAEVISGGAGGSGGSGAVGSGSGGGSGATAPPNLRTTEWPVTASFSTSASN 309
            |:...|....|...:|.....|:..||...::.:|.|..:......:....:.|.|.:.|.||..
  Fly   204 RSAARVGNMTSRPLLAPAPGDGSRLSGIQESIEAGQGIRNVIVEELSTSNYDPPFTINASASAIL 268

  Fly   310 HSQTQSSLAANSLNA 324
            ..|.|..:...|.||
  Fly   269 EQQQQQQVMGPSPNA 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kcmf1NP_001163560.1 ZZ_PCMF_like 7..55 CDD:239078 17/47 (36%)
zf-Di19 76..137 CDD:310299 25/60 (42%)
CG15286NP_001285929.1 ZZ_PCMF_like 9..57 CDD:239078 17/47 (36%)
zf-Di19 78..>107 CDD:283297 17/28 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471875
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1280
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6024
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004459
OrthoInspector 1 1.000 - - otm14750
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.690

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