DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kcmf1 and dah

DIOPT Version :9

Sequence 1:NP_001163560.1 Gene:Kcmf1 / 41082 FlyBaseID:FBgn0037655 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_511162.1 Gene:dah / 32459 FlyBaseID:FBgn0015926 Length:649 Species:Drosophila melanogaster


Alignment Length:473 Identity:93/473 - (19%)
Similarity:156/473 - (32%) Gaps:142/473 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SCDSCLKSNFNGRRYKCLICYDYDLCADCYEDGVTSTRHLVEHPMQCILTRSDIELYFGGEMLAS 72
            ||..|.|.:..|.|::|.:|.|..||..|:..|....||...|.| |             |:...
  Fly   282 SCAGCRKEHIVGIRFRCQVCRDISLCLPCFAVGFAGGRHEPGHRM-C-------------EVFVE 332

  Fly    73 DQPQ-SFTCPYCKKMGFSDATLLEHVSAEHTETSLEVVCPVCAGLPGGEPNLVTDDFAGHLTLEH 136
            |||. .:|....:..|:.       |....|:.                              |.
  Fly   333 DQPPLRWTRHLARLCGWL-------VMPRKTQE------------------------------EE 360

  Fly   137 RQG---PRELISFLDEPSAIRHGGGVRRIPGRTLGGPRT---RRSNMHFSSSSGLSALSPSGRES 195
            |:|   .:|....|.:.:|.......|.:..:.....||   ::......|.:||::.:.|..:|
  Fly   361 RRGFCNAQESGPALGQSAATPIPAETRSVRSQCQEKDRTVVLQQQQQELCSLTGLASEASSRLQS 425

  Fly   196 VDPIAELLSQLSGVRRGGPPTSQLQQLQMQMQLDRQQVTASRQ------IDRLPRRAHPIVSTSN 254
            :  |..||.|.:.:.      :|||.:......:..|..::.|      |:.:.:.:|....||.
  Fly   426 I--IDRLLLQNAKLE------TQLQTVATASSSEISQFLSAHQCFLLQIIEDMRQLSHASAVTSP 482

  Fly   255 SNAAMAEVISGGAGGSGGSGAVGSGSGGGSGATAPPNLRTTEWPVTASFSTSASNHSQTQSSLAA 319
            ..|..|:|....|       .:.|.:...|.......|.....||.|:.:.|.:.....:|.|.|
  Fly   483 PPAPAAQVAPSAA-------PLVSSTFLSSSTPQRQMLFDMYAPVGANLTHSINGADLNRSYLEA 540

  Fly   320 N----SLN--------AREAIGTSSSAGS--NVLGISVGVGG-----TANGNGGAGSSGVATGAG 365
            |    |||        .|.::......||  ..|.:.:.:|.     .|||              
  Fly   541 NKSDYSLNDISLWFDQRRSSVQPGQGPGSLPAPLPLPMPLGALLEQQPANG-------------- 591

  Fly   366 GAGQGGGQGGAAAGESFLLAQFMQPTFTEAEWAVVESMRADRSMFVQSLMLSMLCTEALDLNASD 430
                |.|:.........||.:..:         :||...:|.:                :|:|:.
  Fly   592 ----GDGRDTEMVNFKLLLHKVKE---------IVEDSYSDNA----------------ELSAAT 627

  Fly   431 ESLAK-SDNVNKGQQQQQ 447
            ::|.. .|::.|.::||:
  Fly   628 QNLENVLDSIIKSEEQQR 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kcmf1NP_001163560.1 ZZ_PCMF_like 7..55 CDD:239078 17/46 (37%)
zf-Di19 76..137 CDD:310299 5/61 (8%)
dahNP_511162.1 EF-hand_2 44..168 CDD:286194
ZZ_dah 281..329 CDD:239085 18/60 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471874
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12268
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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