DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kcmf1 and CG3526

DIOPT Version :10

Sequence 1:NP_649861.3 Gene:Kcmf1 / 41082 FlyBaseID:FBgn0037655 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_726832.2 Gene:CG3526 / 31277 FlyBaseID:FBgn0040355 Length:229 Species:Drosophila melanogaster


Alignment Length:217 Identity:77/217 - (35%)
Similarity:104/217 - (47%) Gaps:40/217 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SRHEGVSCDSCLKSNFNGRRYKCLICYDYDLCADCYEDGVTSTRHLVEHPMQCILTRSDIELYFG 66
            |.|..|.||.|..:.....|||||.|.|||||:||.|:||::..|.::||:||::.|..:||:|.
  Fly    25 SGHCNVRCDGCGNNRMTFYRYKCLHCLDYDLCSDCKENGVSNGLHSLDHPLQCLMDRDALELHFA 89

  Fly    67 GE---MLASDQPQSFTCPYCKKMGFSDATLLEHVSAEHTETSLEVVCPVCAGLPGGEPNLVTDDF 128
            ||   :|.:|   |||||.|.:||||...|..|....|.......:|||||.:|..:|:.:. ..
  Fly    90 GEPIPILCAD---SFTCPVCGEMGFSVEDLRTHCQDNHRMARTVCICPVCAAVPLSQPSHIA-HI 150

  Fly   129 AGHLTL--EHRQGPRELI----------SFLDEPSAIRHGGGVRRIPGRTLGGPRTRRSNMHFSS 181
            |.||..  .||.....:|          |.|.:.||:..|.|.:..                |||
  Fly   151 ANHLMFSPSHRATGDPMIDISATSQAEGSSLPQNSAVSSGSGAQHT----------------FSS 199

  Fly   182 S--SGLSALSPSGRESVDPIAE 201
            |  |.:..|.|..|.   |:|:
  Fly   200 SENSQVRFLLPGNRA---PLAD 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kcmf1NP_649861.3 ZZ_PCMF_like 7..55 CDD:239078 24/47 (51%)
zf-Di19 76..137 CDD:428539 23/62 (37%)
CG3526NP_726832.2 ZZ_PCMF_like 30..78 CDD:239078 24/47 (51%)
zf-Di19 99..149 CDD:428539 21/53 (40%)

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