DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kcmf1 and CG3526

DIOPT Version :9

Sequence 1:NP_001163560.1 Gene:Kcmf1 / 41082 FlyBaseID:FBgn0037655 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_726832.2 Gene:CG3526 / 31277 FlyBaseID:FBgn0040355 Length:229 Species:Drosophila melanogaster


Alignment Length:217 Identity:77/217 - (35%)
Similarity:104/217 - (47%) Gaps:40/217 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SRHEGVSCDSCLKSNFNGRRYKCLICYDYDLCADCYEDGVTSTRHLVEHPMQCILTRSDIELYFG 66
            |.|..|.||.|..:.....|||||.|.|||||:||.|:||::..|.::||:||::.|..:||:|.
  Fly    25 SGHCNVRCDGCGNNRMTFYRYKCLHCLDYDLCSDCKENGVSNGLHSLDHPLQCLMDRDALELHFA 89

  Fly    67 GE---MLASDQPQSFTCPYCKKMGFSDATLLEHVSAEHTETSLEVVCPVCAGLPGGEPNLVTDDF 128
            ||   :|.:|   |||||.|.:||||...|..|....|.......:|||||.:|..:|:.:. ..
  Fly    90 GEPIPILCAD---SFTCPVCGEMGFSVEDLRTHCQDNHRMARTVCICPVCAAVPLSQPSHIA-HI 150

  Fly   129 AGHLTL--EHRQGPRELI----------SFLDEPSAIRHGGGVRRIPGRTLGGPRTRRSNMHFSS 181
            |.||..  .||.....:|          |.|.:.||:..|.|.:..                |||
  Fly   151 ANHLMFSPSHRATGDPMIDISATSQAEGSSLPQNSAVSSGSGAQHT----------------FSS 199

  Fly   182 S--SGLSALSPSGRESVDPIAE 201
            |  |.:..|.|..|.   |:|:
  Fly   200 SENSQVRFLLPGNRA---PLAD 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kcmf1NP_001163560.1 ZZ_PCMF_like 7..55 CDD:239078 24/47 (51%)
zf-Di19 76..137 CDD:310299 23/62 (37%)
CG3526NP_726832.2 ZZ_PCMF_like 30..78 CDD:239078 24/47 (51%)
zf-Di19 99..149 CDD:283297 21/53 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471876
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1280
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004459
OrthoInspector 1 1.000 - - otm14750
orthoMCL 1 0.900 - - OOG6_107180
Panther 1 1.100 - - P PTHR12268
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.740

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