DRSC/TRiP Functional Genomics Resources

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Protein Alignment Iru and AT1G14200

DIOPT Version :9

Sequence 1:NP_649859.1 Gene:Iru / 41080 FlyBaseID:FBgn0037653 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_172872.1 Gene:AT1G14200 / 837980 AraportID:AT1G14200 Length:179 Species:Arabidopsis thaliana


Alignment Length:88 Identity:27/88 - (30%)
Similarity:42/88 - (47%) Gaps:4/88 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 REGLDTIVTQMLNQMETSGPPPLSAQRINEIPNVQINAEEVNRKIQCSICWDDFKIDETVRKLPC 271
            |.|||...:....|    |..|.....:..:|.|.|..::......|:||.|::...:...::||
plant    67 RSGLDDFFSDGGKQ----GRSPALKSEVENMPRVVIGEDKEKYGGSCAICLDEWSKGDVAAEMPC 127

  Fly   272 SHLYHENCIVPWLNLHSTCPICR 294
            .|.:|..|:..||..|:|||:||
plant   128 KHKFHSKCVEEWLGRHATCPMCR 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IruNP_649859.1 zinc_ribbon_9 16..46 CDD:373030
RING-H2_RNF126_like 252..294 CDD:319581 15/41 (37%)
HRD1 <253..372 CDD:227568 17/42 (40%)
RING-H2 finger (C3H2C3-type) 253..293 CDD:319581 15/39 (38%)
AT1G14200NP_172872.1 RING-H2_PA-TM-RING 109..150 CDD:319368 15/40 (38%)
RING-H2 finger (C3H2C3-type) 109..149 CDD:319368 15/39 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1249953at2759
OrthoFinder 1 1.000 - - FOG0000184
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15710
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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