DRSC/TRiP Functional Genomics Resources

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Protein Alignment Iru and AT1G14200

DIOPT Version :10

Sequence 1:NP_649859.1 Gene:Iru / 41080 FlyBaseID:FBgn0037653 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_172872.1 Gene:AT1G14200 / 837980 AraportID:AT1G14200 Length:179 Species:Arabidopsis thaliana


Alignment Length:88 Identity:27/88 - (30%)
Similarity:42/88 - (47%) Gaps:4/88 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 REGLDTIVTQMLNQMETSGPPPLSAQRINEIPNVQINAEEVNRKIQCSICWDDFKIDETVRKLPC 271
            |.|||...:....|    |..|.....:..:|.|.|..::......|:||.|::...:...::||
plant    67 RSGLDDFFSDGGKQ----GRSPALKSEVENMPRVVIGEDKEKYGGSCAICLDEWSKGDVAAEMPC 127

  Fly   272 SHLYHENCIVPWLNLHSTCPICR 294
            .|.:|..|:..||..|:|||:||
plant   128 KHKFHSKCVEEWLGRHATCPMCR 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IruNP_649859.1 zinc_ribbon_9 16..46 CDD:433910
RING-H2_RNF126-like 252..294 CDD:438329 15/41 (37%)
HRD1 <253..372 CDD:227568 17/42 (40%)
AT1G14200NP_172872.1 RING-H2_PA-TM-RING 108..150 CDD:438118 15/41 (37%)
Blue background indicates that the domain is not in the aligned region.

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