DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Iru and ATCRT1

DIOPT Version :9

Sequence 1:NP_649859.1 Gene:Iru / 41080 FlyBaseID:FBgn0037653 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_200445.1 Gene:ATCRT1 / 835734 AraportID:AT5G56340 Length:396 Species:Arabidopsis thaliana


Alignment Length:455 Identity:108/455 - (23%)
Similarity:161/455 - (35%) Gaps:150/455 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEAMVVEDRPAEAKRFFCHMCNVEIN-IPNSDFTCPLCANGFVEELPANA---------PEMDS 55
            |.|.|        |.|::||||:..:| :..|:..||.|.:||:||:..|.         ...||
plant     1 MEETM--------AARYWCHMCSQMVNPVMESEIKCPFCQSGFIEEMSGNGGGGGGRGIRDVQDS 57

  Fly    56 STAGASGSA---------------------RSGSSGSGSSGSHDTLS-----RGSSSSGSQVNVE 94
            .|...:..|                     |....|..:..:.|.|:     .|:.|:.|..||.
plant    58 ETDFGTDRALSLWAPILLGMMSSPRRRRRFRRSEFGEENDDNGDDLTTNADGNGNDSNNSNNNVY 122

  Fly    95 ------------SLRNDIVSLLNMRNVPNLEITIEPNRRHSNVLHLGGFGGPSGSDSARGLTAGG 147
                        .|..:..|:|..|           .|...|:|.|           .:|:.||.
plant   123 RHHRARRHGGEIDLDREFESILRRR-----------RRSSGNILQL-----------LQGIRAGI 165

  Fly   148 RVRPANLD-RLDN--------VLFDFLQSLPLAGATAEIVTGPGGGGVGGGGNSHMFFMGNPGDY 203
            .....:.| ..||        ::..:.|||.                |....|.:...:.:.|||
plant   166 ASEYESSDNNWDNSRERDRVIMINPYNQSLV----------------VPSDQNQNHPSLTSLGDY 214

  Fly   204 AWGREGLDTIVTQML-NQMETSGPPPLSAQRINEIPNVQINAEEVNRKIQCSICWDDFKIDETVR 267
            ..| .|||.::..:. |.....|.||...:.:..:|.|:|     ...:|||:|.|||:.....:
plant   215 FIG-PGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKI-----MEPLQCSVCLDDFEKGTEAK 273

  Fly   268 KLPCSHLYHENCIVPWLNLHSTCPICRKSLADDGNDADDEFVMLDAFGPEMAADGSNSER----- 327
            ::||.|.:|..||||||.|||:||:||..|....:| |||             ..::|||     
plant   274 EMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADD-DDE-------------TKTDSERVLRTR 324

  Fly   328 --RSASTATGTDNPSPANNPSQAAAEGGRTRPDANP-------------------AQAARNNIFT 371
              |..|.....:|...|:...:.....|..|..:.|                   :|:..||.|:
plant   325 NVRETSNGNVVENVGNADRGREDEVRSGNGRRFSFPWPFSGLFSSSSSSSSSTSGSQSGENNFFS 389

  Fly   372  371
            plant   390  389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IruNP_649859.1 zinc_ribbon_9 16..46 CDD:373030 13/30 (43%)
RING-H2_RNF126_like 252..294 CDD:319581 22/41 (54%)
HRD1 <253..372 CDD:227568 42/145 (29%)
RING-H2 finger (C3H2C3-type) 253..293 CDD:319581 21/39 (54%)
ATCRT1NP_200445.1 zinc_ribbon_9 8..39 CDD:405118 13/30 (43%)
RING-H2_RNF181 258..303 CDD:319583 24/44 (55%)
HRD1 <259..359 CDD:227568 37/113 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I1871
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1249953at2759
OrthoFinder 1 1.000 - - FOG0000184
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR15710
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X390
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
88.030

Return to query results.
Submit another query.