DRSC/TRiP Functional Genomics Resources

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Protein Alignment Iru and AT5G37230

DIOPT Version :9

Sequence 1:NP_649859.1 Gene:Iru / 41080 FlyBaseID:FBgn0037653 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_198539.1 Gene:AT5G37230 / 833697 AraportID:AT5G37230 Length:208 Species:Arabidopsis thaliana


Alignment Length:67 Identity:24/67 - (35%)
Similarity:38/67 - (56%) Gaps:3/67 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 QRINEIPNVQINAEEVNRKIQCSICWDDF--KIDETVRKLP-CSHLYHENCIVPWLNLHSTCPIC 293
            ||:.|...:::.......:..||||.:||  ..|:.:..|| |.||:|::||..||....:||:|
plant   132 QRLLEEQTMELTNLGDEEETTCSICMEDFSESHDDNIILLPDCFHLFHQSCIFKWLKRQRSCPLC 196

  Fly   294 RK 295
            |:
plant   197 RR 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IruNP_649859.1 zinc_ribbon_9 16..46 CDD:373030
RING-H2_RNF126_like 252..294 CDD:319581 19/44 (43%)
HRD1 <253..372 CDD:227568 21/46 (46%)
RING-H2 finger (C3H2C3-type) 253..293 CDD:319581 19/42 (45%)
AT5G37230NP_198539.1 RING-H2_PA-TM-RING 152..197 CDD:319368 19/44 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1249953at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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