DRSC/TRiP Functional Genomics Resources

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Protein Alignment Iru and RING1

DIOPT Version :10

Sequence 1:NP_649859.1 Gene:Iru / 41080 FlyBaseID:FBgn0037653 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_196600.1 Gene:RING1 / 830902 AraportID:AT5G10380 Length:301 Species:Arabidopsis thaliana


Alignment Length:176 Identity:44/176 - (25%)
Similarity:68/176 - (38%) Gaps:50/176 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 PGDYAWGREGLDTIVTQMLNQMETSGPPPLSAQRINEIPNVQINAEEVN-------RK------- 250
            |||           ..|..::.||..........:.:||.|.::...:|       :|       
plant    79 PGD-----------TNQQEDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDG 132

  Fly   251 IQCSICWDDFKIDETVRKLP-CSHLYHENCIVPWLNLHSTCPICRKSLADDGNDADDEFVMLDAF 314
            .:||:|.::|:.||::|.|| |||.:|.|||..||..|..||:||..            |:|...
plant   133 TECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAP------------VLLITE 185

  Fly   315 GPEMAADGSNSERRSASTATGTDNPSPANNPSQAAAEGGRTRPDAN 360
            .|..            .|.|.....|.::|..:...:..|:|.:.|
plant   186 PPHQ------------ETETNHQPDSESSNDLRGRQDSSRSRRNHN 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IruNP_649859.1 zinc_ribbon_9 16..46 CDD:433910
RING-H2_RNF126-like 252..294 CDD:438329 21/42 (50%)
HRD1 <253..372 CDD:227568 33/109 (30%)
RING1NP_196600.1 RING-H2_EL5-like 134..177 CDD:438124 21/42 (50%)
Blue background indicates that the domain is not in the aligned region.

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