DRSC/TRiP Functional Genomics Resources

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Protein Alignment Iru and rnf38

DIOPT Version :10

Sequence 1:NP_649859.1 Gene:Iru / 41080 FlyBaseID:FBgn0037653 Length:380 Species:Drosophila melanogaster
Sequence 2:XP_695200.4 Gene:rnf38 / 566820 ZFINID:ZDB-GENE-030131-8693 Length:673 Species:Danio rerio


Alignment Length:93 Identity:29/93 - (31%)
Similarity:50/93 - (53%) Gaps:4/93 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 MLNQMETSG---PPPLSAQRINEIPNVQIN-AEEVNRKIQCSICWDDFKIDETVRKLPCSHLYHE 277
            :||..|..|   |..|:...|.::|:.:.| :...:.:..|.:|..||:..:.:|.|||:|.:|.
Zfish   581 LLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHA 645

  Fly   278 NCIVPWLNLHSTCPICRKSLADDGNDAD 305
            .|:..||..:.||||||...::...|::
Zfish   646 KCVDKWLKANRTCPICRADASEVQRDSE 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IruNP_649859.1 zinc_ribbon_9 16..46 CDD:433910
RING-H2_RNF126-like 252..294 CDD:438329 17/41 (41%)
HRD1 <253..372 CDD:227568 20/53 (38%)
rnf38XP_695200.4 RING-H2_RNF38 599..665 CDD:438341 22/65 (34%)
Blue background indicates that the domain is not in the aligned region.

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