DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Iru and rnf115b

DIOPT Version :9

Sequence 1:NP_649859.1 Gene:Iru / 41080 FlyBaseID:FBgn0037653 Length:380 Species:Drosophila melanogaster
Sequence 2:XP_003200594.1 Gene:rnf115b / 563879 ZFINID:ZDB-GENE-060503-608 Length:301 Species:Danio rerio


Alignment Length:320 Identity:102/320 - (31%)
Similarity:152/320 - (47%) Gaps:64/320 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEAMVVEDRPAEAKRFFCHMCNVEINIPNSDFTCPLCANGFVEELPANAPEMDSSTAGASGSAR 65
            ||||..     |...|||||.|..||:....::.||.|.:||:||:..|...:.:         |
Zfish     1 MAEAAA-----APRHRFFCHCCKGEIDPKLPEYVCPRCESGFIEEVSENFSLLQN---------R 51

  Fly    66 SGSSGSGSSGSHDTLSRGSSSSGSQVNVESLRNDIVSLLNMRNVPNLEITIEPNRRHSNVLHLGG 130
            .|::|:||                    :.:.:....|..:..:.:..:..||:  .::.|...|
Zfish    52 DGAAGTGS--------------------DDMTSQFAELWQLLFMEHSALLSEPS--VTDALRSSG 94

  Fly   131 FGGPSGSDSARGLTAG--------------GRVRPANLDRLDNVLFDFLQSLPLAGATAEIVTGP 181
            . .|:.:|.|.| |||              .:..|....|.|       |...:.|...:.:.|.
Zfish    95 L-QPAVADPASG-TAGPVASVESLSDCTEPQQNSPQTNSRQD-------QGQAVEGIVQQFLAGL 150

  Fly   182 GGGGVGGGGNSHMF---FMGNPGDYAWGREGLDTIVTQMLNQMETSGPPPLSAQRINEIPNVQIN 243
            .......|..:..:   ...||||||||:.|||.:|||:|.|.|.|||||...:.|:.:|.|.|:
Zfish   151 FSNSDSAGPQTSSWSSALHSNPGDYAWGQGGLDAVVTQLLGQSENSGPPPAEKEMISSLPTVSIS 215

  Fly   244 AEEVNRKIQCSICWDDFKIDETVRKLPCSHLYHENCIVPWLNLHSTCPICRKSLADDGND 303
            :|:...:::|.:|.::|.:.|:||:|||.|.:|.:||||||.||.|||:|||||  ||.|
Zfish   216 SEQAACRLECPVCREEFSVGESVRQLPCLHYFHSSCIVPWLQLHDTCPVCRKSL--DGED 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IruNP_649859.1 zinc_ribbon_9 16..46 CDD:373030 14/29 (48%)
RING-H2_RNF126_like 252..294 CDD:319581 22/41 (54%)
HRD1 <253..372 CDD:227568 30/51 (59%)
RING-H2 finger (C3H2C3-type) 253..293 CDD:319581 22/39 (56%)
rnf115bXP_003200594.1 zinc_ribbon_9 11..41 CDD:291067 14/29 (48%)
zf-RING_2 224..266 CDD:290367 22/41 (54%)
RING <250..288 CDD:302633 19/26 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 72 1.000 Domainoid score I9275
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 171 1.000 Inparanoid score I4087
OMA 1 1.010 - - QHG46695
OrthoDB 1 1.010 - - D1249953at2759
OrthoFinder 1 1.000 - - FOG0000184
OrthoInspector 1 1.000 - - otm24792
orthoMCL 1 0.900 - - OOG6_102823
Panther 1 1.100 - - O PTHR15710
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X390
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.940

Return to query results.
Submit another query.