DRSC/TRiP Functional Genomics Resources

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Protein Alignment Iru and Rnf122

DIOPT Version :9

Sequence 1:NP_649859.1 Gene:Iru / 41080 FlyBaseID:FBgn0037653 Length:380 Species:Drosophila melanogaster
Sequence 2:XP_038951021.1 Gene:Rnf122 / 502091 RGDID:1561238 Length:183 Species:Rattus norvegicus


Alignment Length:175 Identity:35/175 - (20%)
Similarity:64/175 - (36%) Gaps:62/175 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 HMFFMGNPGDYAWGREGLDTIVTQ--------------MLNQMETSGPPPLSAQRI--------- 234
            |..|:       |..||...:..:              :::..::...||:|.|.:         
  Rat    13 HQIFL-------WQDEGRRLLAVEGGPVGPEGCFCGLGLVSTNKSCSMPPISFQDLPLNIYMVIF 70

  Fly   235 ----------------------NEIPNVQINAEEV-----NRKIQ-----CSICWDDFKIDETVR 267
                                  |:..:.:...:||     .:|:|     |::|.:|||..:.:.
  Rat    71 GTGIFVFMLSLIFCCYFISKLRNQAQSERYGYKEVVLKGDAKKLQLYGQTCAVCLEDFKGKDELG 135

  Fly   268 KLPCSHLYHENCIVPWLNLHSTCPICRKSLADDGNDADDEFVMLD 312
            .|||.|.:|..|:|.||.:...||:|.|.:|.....:....::||
  Rat   136 VLPCQHAFHRKCLVKWLEVRCVCPMCNKPIAGPTETSQSIGILLD 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IruNP_649859.1 zinc_ribbon_9 16..46 CDD:373030
RING-H2_RNF126_like 252..294 CDD:319581 17/46 (37%)
HRD1 <253..372 CDD:227568 21/60 (35%)
RING-H2 finger (C3H2C3-type) 253..293 CDD:319581 16/39 (41%)
Rnf122XP_038951021.1 RING-H2_RNF24_like 119..165 CDD:319383 18/45 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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