DRSC/TRiP Functional Genomics Resources

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Protein Alignment Iru and Rnf44

DIOPT Version :10

Sequence 1:NP_649859.1 Gene:Iru / 41080 FlyBaseID:FBgn0037653 Length:380 Species:Drosophila melanogaster
Sequence 2:XP_006253695.1 Gene:Rnf44 / 361212 RGDID:1307212 Length:433 Species:Rattus norvegicus


Alignment Length:93 Identity:29/93 - (31%)
Similarity:52/93 - (55%) Gaps:4/93 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 MLNQMETSG---PPPLSAQRINEIPNVQINAE-EVNRKIQCSICWDDFKIDETVRKLPCSHLYHE 277
            :||..|..|   |..|:...|.::|:.:.|.: ..:.:..|.:|:.||::.:.:|.|||:|.:|.
  Rat   341 LLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHA 405

  Fly   278 NCIVPWLNLHSTCPICRKSLADDGNDAD 305
            .|:..||..:.||||||...::...:|:
  Rat   406 KCVDKWLKANRTCPICRADASEVPREAE 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IruNP_649859.1 zinc_ribbon_9 16..46 CDD:433910
RING-H2_RNF126-like 252..294 CDD:438329 17/41 (41%)
HRD1 <253..372 CDD:227568 20/53 (38%)
Rnf44XP_006253695.1 RING_Ubox 372..433 CDD:473075 19/60 (32%)
Blue background indicates that the domain is not in the aligned region.

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