DRSC/TRiP Functional Genomics Resources

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Protein Alignment Iru and Rnf44

DIOPT Version :9

Sequence 1:NP_649859.1 Gene:Iru / 41080 FlyBaseID:FBgn0037653 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001139497.1 Gene:Rnf44 / 105239 MGIID:2145310 Length:432 Species:Mus musculus


Alignment Length:93 Identity:29/93 - (31%)
Similarity:52/93 - (55%) Gaps:4/93 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 MLNQMETSG---PPPLSAQRINEIPNVQINAE-EVNRKIQCSICWDDFKIDETVRKLPCSHLYHE 277
            :||..|..|   |..|:...|.::|:.:.|.: ..:.:..|.:|:.||::.:.:|.|||:|.:|.
Mouse   340 LLNLAERLGDAKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHA 404

  Fly   278 NCIVPWLNLHSTCPICRKSLADDGNDAD 305
            .|:..||..:.||||||...::...:|:
Mouse   405 KCVDKWLKANRTCPICRADASEVPREAE 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IruNP_649859.1 zinc_ribbon_9 16..46 CDD:373030
RING-H2_RNF126_like 252..294 CDD:319581 17/41 (41%)
HRD1 <253..372 CDD:227568 20/53 (38%)
RING-H2 finger (C3H2C3-type) 253..293 CDD:319581 16/39 (41%)
Rnf44NP_001139497.1 RING-H2_RNF38_like 377..421 CDD:319386 17/43 (40%)
RING-H2 finger (C3H2C3-type) 380..420 CDD:319386 16/39 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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