DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and PUP3

DIOPT Version :9

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_011020.3 Gene:PUP3 / 856830 SGDID:S000000896 Length:205 Species:Saccharomyces cerevisiae


Alignment Length:199 Identity:109/199 - (54%)
Similarity:152/199 - (76%) Gaps:1/199 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRK 71
            |||.||||.||||||||.|.|.|.|:..:|..|:|:||.| .:|||:|||.||:.|:.:...::.
Yeast     8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYG-HVFLGITGLATDVTTLNEMFRYKT 71

  Fly    72 NLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCPNAPDDF 136
            |||:.:|.|.:.|:.|:.::||.|||.||||||:.|||||::.|:.:|||...|||||.:...||
Yeast    72 NLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDF 136

  Fly   137 VVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEKDKITERTLK 201
            :|:||.::||:||||:|::|:|||:.|||.|:|:::||.||||:|||||.||||:||::.:|.||
Yeast   137 IVSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVVYIIKKDEVVKRYLK 201

  Fly   202 TRMD 205
            .|.|
Yeast   202 MRQD 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 105/193 (54%)
PUP3NP_011020.3 proteasome_beta_type_3 8..201 CDD:239728 105/193 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341324
Domainoid 1 1.000 220 1.000 Domainoid score I461
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2089
Inparanoid 1 1.050 234 1.000 Inparanoid score I712
Isobase 1 0.950 - 0 Normalized mean entropy S357
OMA 1 1.010 - - QHG53924
OrthoFinder 1 1.000 - - FOG0003566
OrthoInspector 1 1.000 - - oto98979
orthoMCL 1 0.900 - - OOG6_101970
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1011
SonicParanoid 1 1.000 - - X2440
TreeFam 1 0.960 - -
1615.740

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