DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta3 and PRE5

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_014045.1 Gene:PRE5 / 855362 SGDID:S000004931 Length:234 Species:Saccharomyces cerevisiae


Alignment Length:211 Identity:44/211 - (20%)
Similarity:75/211 - (35%) Gaps:48/211 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRD------- 65
            |...|.:|......:....|   .|..:|:..||:......|.|.|.||..|...:.:       
Yeast    32 GSVTVGLRSNTHAVLVALKR---NADELSSYQKKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCN 93

  Fly    66 --RLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIG 128
              .|:|.:.|...|....:|.|   |..::..|..|  ||.:..::.|.|..       ...|: 
Yeast    94 YSSLVFNRKLAVERAGHLLCDK---AQKNTQSYGGR--PYGVGLLIIGYDKS-------GAHLL- 145

  Fly   129 CPNAPDDFVVAGTCAEQLYGMC----------------ETLWKPDLEPDQLFEVIAQSIVNAFDR 177
                  :|..:|...| |||..                :|..|.|..||:|.:...::|..:...
Yeast   146 ------EFQPSGNVTE-LYGTAIGARSQGAKTYLERTLDTFIKIDGNPDELIKAGVEAISQSLRD 203

  Fly   178 DAMSGWGATVYIIEKD 193
            ::::....::.|:.||
Yeast   204 ESLTVDNLSIAIVGKD 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 44/211 (21%)
PRE5NP_014045.1 Ntn_hydrolase 6..217 CDD:469781 42/207 (20%)

Return to query results.
Submit another query.