DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and PUP2

DIOPT Version :9

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_011769.1 Gene:PUP2 / 853168 SGDID:S000003485 Length:260 Species:Saccharomyces cerevisiae


Alignment Length:126 Identity:22/126 - (17%)
Similarity:41/126 - (32%) Gaps:39/126 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GKDCVAIATDHR--FGIQAQTI-----STDFKKVFHIGPRMFLGLTGLQTDILTVRDR---LMFR 70
            |...:.|||...  .|::.:..     |...:|:..|...:...::||..|..::.:.   ....
Yeast    34 GSTAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVT 98

  Fly    71 KNLYETRE------NREMCPKPFSAMMSSFLYEHRFG------------PYFIEPVVAGLD 113
            .|||...:      .:.:|....           |||            |:.:..::||.|
Yeast    99 HNLYYDEDINVESLTQSVCDLAL-----------RFGEGASGEERLMSRPFGVALLIAGHD 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 22/126 (17%)
PUP2NP_011769.1 proteasome_alpha_type_5 8..222 CDD:239722 22/126 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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