DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and SCL1

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_011504.3 Gene:SCL1 / 852873 SGDID:S000002979 Length:252 Species:Saccharomyces cerevisiae


Alignment Length:145 Identity:24/145 - (16%)
Similarity:45/145 - (31%) Gaps:48/145 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VAMRGKDCVAIATDHRFG---IQAQTISTDFKKVFHIGPRMFLGLTG------------------ 55
            :|:|||||..:.:..:..   :...|:|    .:|.|...:.:.:.|                  
Yeast    43 LAVRGKDCTVVISQKKVPDKLLDPTTVS----YIFCISRTIGMVVNGPIPDARNAALRAKAEAAE 103

  Fly    56 --------LQTDILTVRDRLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGP---------Y 103
                    :..|:|..|     ..||.:....|... :|...:::....:...||         |
Yeast   104 FRYKYGYDMPCDVLAKR-----MANLSQIYTQRAYM-RPLGVILTFVSVDEELGPSIYKTDPAGY 162

  Fly   104 FIEPVVAGLDPKTME 118
            ::........||..|
Yeast   163 YVGYKATATGPKQQE 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 24/145 (17%)
SCL1NP_011504.3 proteasome_alpha_type_6 12..228 CDD:239723 24/145 (17%)

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