DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta3 and PBC2

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_565156.1 Gene:PBC2 / 844080 AraportID:AT1G77440 Length:204 Species:Arabidopsis thaliana


Alignment Length:205 Identity:105/205 - (51%)
Similarity:148/205 - (72%) Gaps:1/205 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSILAYNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRD 65
            |||..|||..||||.||:|.|||:|.|.|:|.|||:|||:::..|...:|:||:||.||:.|:..
plant     1 MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQ 65

  Fly    66 RLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMDLIGCP 130
            ||:||..||:.||.|:|.|:.|::::|:.|||.||||:..:||:|||.... :||||.||.||..
plant    66 RLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDN-KPFICTMDSIGAK 129

  Fly   131 NAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMSGWGATVYIIEKDKI 195
            ....||||:||.:|.|||.||.::|||:|.::|||.|:|:::::.|||.:||||..||::...::
plant   130 ELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLSGWGGHVYVVTPKEV 194

  Fly   196 TERTLKTRMD 205
            .||.||.|||
plant   195 KERILKGRMD 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 97/194 (50%)
PBC2NP_565156.1 proteasome_beta_type_3 6..200 CDD:239728 97/194 (50%)

Return to query results.
Submit another query.