DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta3 and Psma8

DIOPT Version :10

Sequence 1:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster
Sequence 2:NP_001157081.1 Gene:Psma8 / 73677 MGIID:1920927 Length:250 Species:Mus musculus


Alignment Length:110 Identity:20/110 - (18%)
Similarity:39/110 - (35%) Gaps:5/110 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTD----ILTVRDRLM 68
            |...|.:||.:.|.:..:.:...:.|...| .:|:..:...:.:...||..|    |...|....
Mouse    31 GSTAVGIRGTNIVVLGVEKKSVAKLQDERT-VRKICALDDHVCMAFAGLTADARVVISRARVECQ 94

  Fly    69 FRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLD 113
            ..|...|.....|...:..:.:...:...:...|:.|..::.|.|
Mouse    95 SHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFD 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 20/110 (18%)
Psma8NP_001157081.1 proteasome_alpha_type_7 5..213 CDD:239724 20/110 (18%)

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